RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CT45A10P0DMU9 189 aa18.44■□□□□ 0.54
PABPN1-202ENST00000397276 FAM110DQ8TAY7 271 aaPredicted RBP18.44■□□□□ 0.54
PABPN1-202ENST00000397276 OVOL3O00110 214 aa18.44■□□□□ 0.54
PABPN1-202ENST00000397276 CSMD2Q7Z408 3487 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 IGHV3-49A0A0A0MS15 119 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 TRBV6-1A0A0K0K1D8 114 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 FAM231BA6NCW3 169 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 PIEZO1Q92508 2521 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 A0A1B0GUT8 65 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 SCGB2A1O75556 95 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 C16orf54Q6UWD8 224 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 ZNF502Q8TBZ5 544 aa18.43■□□□□ 0.54
PABPN1-202ENST00000397276 FAM106AQ4KMX7 169 aa18.42■□□□□ 0.54
PABPN1-202ENST00000397276 C12orf54Q6X4T0 127 aa18.42■□□□□ 0.54
PABPN1-202ENST00000397276 HAX1O00165 279 aa18.42■□□□□ 0.54
PABPN1-202ENST00000397276 ZNF207O43670 478 aaKnown RBP18.42■□□□□ 0.54
PABPN1-202ENST00000397276 VGLL1Q99990 258 aa18.42■□□□□ 0.54
PABPN1-202ENST00000397276 NDFIP1Q9BT67 221 aa18.42■□□□□ 0.54
PABPN1-202ENST00000397276 FAM162BQ5T6X4 162 aa18.42■□□□□ 0.54
PABPN1-202ENST00000397276 PPBPP02775 128 aa18.41■□□□□ 0.54
PABPN1-202ENST00000397276 C2orf91Q6ZV80 131 aa18.41■□□□□ 0.54
PABPN1-202ENST00000397276 CRYBG3Q68DQ2 2970 aa18.41■□□□□ 0.54
PABPN1-202ENST00000397276 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.41■□□□□ 0.54
PABPN1-202ENST00000397276 GAGE12BA1L429 117 aa18.41■□□□□ 0.54
PABPN1-202ENST00000397276 NAA38Q9BRA0 125 aaKnown RBP18.41■□□□□ 0.54
PABPN1-202ENST00000397276 IGHV4-61A0A0C4DH41 118 aa18.4■□□□□ 0.54
PABPN1-202ENST00000397276 PET117Q6UWS5 81 aa18.4■□□□□ 0.54
PABPN1-202ENST00000397276 OR5AL1P0C617 328 aa18.4■□□□□ 0.54
PABPN1-202ENST00000397276 CCDC140Q96MF4 163 aa18.4■□□□□ 0.54
PABPN1-202ENST00000397276 CELSR2Q9HCU4 2923 aa18.39■□□□□ 0.54
PABPN1-202ENST00000397276 TRAV40A0A0B4J280 105 aa18.39■□□□□ 0.53
PABPN1-202ENST00000397276 SH2D1AO60880 128 aa18.39■□□□□ 0.53
PABPN1-202ENST00000397276 IGHG4P01861 327 aa18.39■□□□□ 0.53
PABPN1-202ENST00000397276 FXYD7P58549 80 aa18.39■□□□□ 0.53
PABPN1-202ENST00000397276 CD5LO43866 347 aa18.38■□□□□ 0.53
PABPN1-202ENST00000397276 LOXL1Q08397 574 aaPredicted RBP18.38■□□□□ 0.53
PABPN1-202ENST00000397276 RNF182Q8N6D2 247 aa18.38■□□□□ 0.53
PABPN1-202ENST00000397276 C5orf56Q8N8D9 126 aa18.38■□□□□ 0.53
PABPN1-202ENST00000397276 SAP30O75446 220 aa18.38■□□□□ 0.53
PABPN1-202ENST00000397276 HIST1H1AQ02539 215 aaPredicted RBP18.38■□□□□ 0.53
PABPN1-202ENST00000397276 FLNCQ14315 2725 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 ABCA2Q9BZC7 2435 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 TMEM189A5PLL7 270 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 RIGQ13278 110 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 LINC01545Q5VT33 79 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 PRR25Q96S07 402 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 CCL19Q99731 98 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 ZFAND3Q9H8U3 227 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 ERCC8Q13216 396 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 LYZL1Q6UWQ5 148 aa18.37■□□□□ 0.53
PABPN1-202ENST00000397276 SERTM2A0A1B0GWG4 89 aa18.36■□□□□ 0.53
PABPN1-202ENST00000397276 C7orf71A4D174 169 aa18.36■□□□□ 0.53
PABPN1-202ENST00000397276 ZNF80P51504 273 aaPredicted RBP18.36■□□□□ 0.53
PABPN1-202ENST00000397276 ZNF747Q9BV97 191 aa18.36■□□□□ 0.53
PABPN1-202ENST00000397276 HSPB8Q9UJY1 196 aa18.36■□□□□ 0.53
PABPN1-202ENST00000397276 UTP20O75691 2785 aaKnown RBP18.36■□□□□ 0.53
PABPN1-202ENST00000397276 TMEM213A2RRL7 107 aa18.36■□□□□ 0.53
PABPN1-202ENST00000397276 PRAC2D3DTV9 90 aa18.36■□□□□ 0.53
PABPN1-202ENST00000397276 GOSR1O95249 250 aa18.36■□□□□ 0.53
PABPN1-202ENST00000397276 BUB3O43684 328 aa18.35■□□□□ 0.53
PABPN1-202ENST00000397276 COX8AP10176 69 aa18.35■□□□□ 0.53
PABPN1-202ENST00000397276 LY6EQ16553 131 aa18.35■□□□□ 0.53
PABPN1-202ENST00000397276 AP5S1Q9NUS5 200 aa18.35■□□□□ 0.53
PABPN1-202ENST00000397276 LOC389332A0A1B0GUA5 103 aa18.35■□□□□ 0.53
PABPN1-202ENST00000397276 PAX8Q06710 450 aa18.35■□□□□ 0.53
PABPN1-202ENST00000397276 PIMREGQ9BSJ6 248 aa18.34■□□□□ 0.53
PABPN1-202ENST00000397276 MS4A6AQ9H2W1 248 aa18.34■□□□□ 0.53
PABPN1-202ENST00000397276 IGHV4-38-2P0DP08 117 aa18.34■□□□□ 0.53
PABPN1-202ENST00000397276 OR8A1Q8NGG7 326 aa18.34■□□□□ 0.53
PABPN1-202ENST00000397276 CLPSL1A2RUU4 121 aa18.33■□□□□ 0.53
PABPN1-202ENST00000397276 EEF1AKMT3Q96AZ1 226 aa18.33■□□□□ 0.53
PABPN1-202ENST00000397276 IGHV1-69DA0A0B4J2H0 117 aa18.33■□□□□ 0.52
PABPN1-202ENST00000397276 IGHV1-69P01742 117 aa18.33■□□□□ 0.52
PABPN1-202ENST00000397276 IFI27P40305 119 aaPredicted RBP18.33■□□□□ 0.52
PABPN1-202ENST00000397276 PIFOQ8TCI5 191 aa18.33■□□□□ 0.52
PABPN1-202ENST00000397276 PRSS3P2Q8NHM4 247 aa18.32■□□□□ 0.52
PABPN1-202ENST00000397276 ATP5J2P56134 94 aa18.32■□□□□ 0.52
PABPN1-202ENST00000397276 PEF1Q9UBV8 284 aaKnown RBP18.32■□□□□ 0.52
PABPN1-202ENST00000397276 TMEM97Q5BJF2 176 aa18.31■□□□□ 0.52
PABPN1-202ENST00000397276 TMEM190Q8WZ59 177 aa18.31■□□□□ 0.52
PABPN1-202ENST00000397276 IGSF10Q6WRI0 2623 aa18.31■□□□□ 0.52
PABPN1-202ENST00000397276 A0A096LNJ9 63 aa18.31■□□□□ 0.52
PABPN1-202ENST00000397276 RIPPLY3P57055 190 aa18.31■□□□□ 0.52
PABPN1-202ENST00000397276 JMJD8Q96S16 334 aa18.31■□□□□ 0.52
PABPN1-202ENST00000397276 MOB4Q9Y3A3 225 aa18.31■□□□□ 0.52
PABPN1-202ENST00000397276 IGHV4-30-2A0A087WSY4 118 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 TRAV41A0A0B4J266 112 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 ATP5G2Q06055 141 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 MEGF9Q9H1U4 602 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 ORM1P02763 201 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 RPS20P60866 119 aaKnown RBP18.3■□□□□ 0.52
PABPN1-202ENST00000397276 FA2HQ7L5A8 372 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 AMN1Q8IY45 258 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 NRGNQ92686 78 aa18.3■□□□□ 0.52
PABPN1-202ENST00000397276 GAGE10A6NGK3 116 aa18.29■□□□□ 0.52
PABPN1-202ENST00000397276 FGF6P10767 208 aa18.29■□□□□ 0.52
PABPN1-202ENST00000397276 C10orf105Q8TEF2 133 aa18.29■□□□□ 0.52
PABPN1-202ENST00000397276 CSTL1Q9H114 145 aa18.29■□□□□ 0.52
PABPN1-202ENST00000397276 USP9XQ93008 2570 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms