RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 IGHV2-70DA0A0C4DH43 119 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 TRACP01848 142 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 ZNF503Q96F45 646 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 MAP1BP46821 2468 aaKnown RBP13.09□□□□□ -0.31
RGP1-201ENST00000378078 SYS1-DBNDD2H3BUS1 97 aa13.08□□□□□ -0.31
RGP1-201ENST00000378078 DIAPH2-AS1Q14236 149 aa13.08□□□□□ -0.31
RGP1-201ENST00000378078 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.31
RGP1-201ENST00000378078 Q86TA4 180 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 CCL24O00175 119 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 IGHV4-59P01825 116 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 NBL1P41271 181 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 K7ENP7 123 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 AMBPP02760 352 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 AKAP6Q13023 2319 aa13.08□□□□□ -0.32
RGP1-201ENST00000378078 INTS1Q8N201 2190 aaKnown RBP13.07□□□□□ -0.32
RGP1-201ENST00000378078 HLA-DMBP28068 263 aa13.07□□□□□ -0.32
RGP1-201ENST00000378078 A0A0G2JRQ6 117 aa13.07□□□□□ -0.32
RGP1-201ENST00000378078 NCR3O14931 201 aa13.07□□□□□ -0.32
RGP1-201ENST00000378078 GNRH2O43555 120 aa13.07□□□□□ -0.32
RGP1-201ENST00000378078 NDUFS7O75251 213 aa13.07□□□□□ -0.32
RGP1-201ENST00000378078 CHD3Q12873 2000 aaKnown RBP13.07□□□□□ -0.32
RGP1-201ENST00000378078 K7EMI3 77 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 C3orf79P0CE67 100 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 NPBQ8NG41 125 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 SRSF8Q9BRL6 282 aaKnown RBP13.06□□□□□ -0.32
RGP1-201ENST00000378078 IFI6P09912 130 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 CITED1Q99966 193 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 U3KQE9 123 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
RGP1-201ENST00000378078 ZNF362Q5T0B9 420 aaPredicted RBP13.05□□□□□ -0.32
RGP1-201ENST00000378078 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
RGP1-201ENST00000378078 K7ERJ3 54 aa13.05□□□□□ -0.32
RGP1-201ENST00000378078 CDKN1BP46527 198 aa13.05□□□□□ -0.32
RGP1-201ENST00000378078 ID3Q02535 119 aa13.05□□□□□ -0.32
RGP1-201ENST00000378078 SCN10AQ9Y5Y9 1956 aa13.05□□□□□ -0.32
RGP1-201ENST00000378078 FGF6P10767 208 aa13.05□□□□□ -0.32
RGP1-201ENST00000378078 GRNP28799 593 aaKnown RBP13.05□□□□□ -0.32
RGP1-201ENST00000378078 C15orf62A8K5M9 175 aa13.05□□□□□ -0.32
RGP1-201ENST00000378078 MRPL52Q86TS9 123 aaKnown RBP13.05□□□□□ -0.32
RGP1-201ENST00000378078 NDUFS8O00217 210 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 LYPD3O95274 346 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 CFHR4Q92496 578 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 SHANK2-AS3Q9BTD1 123 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 C14orf132Q9NPU4 83 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 PNRC2Q9NPJ4 139 aaKnown RBP13.04□□□□□ -0.32
RGP1-201ENST00000378078 NEUROG3Q9Y4Z2 214 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 PIFOQ8TCI5 191 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 UBE2AP49459 152 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 C4orf48Q5BLP8 95 aa13.04□□□□□ -0.32
RGP1-201ENST00000378078 TSSC4Q9Y5U2 329 aaPredicted RBP13.04□□□□□ -0.32
RGP1-201ENST00000378078 EGR2P11161 476 aaPredicted RBP13.03□□□□□ -0.32
RGP1-201ENST00000378078 UBL5Q9BZL1 73 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 UBE2CO00762 179 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 HIST3H2BBQ8N257 126 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 CYYR1Q96J86 154 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 MED12Q93074 2177 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 LOC105371267A0A1B0GV96 52 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 NCKAP5O14513 1909 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 IGHV1-24A0A0C4DH33 117 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 SDHAF1A6NFY7 115 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 INAFM2P0DMQ5 153 aa13.03□□□□□ -0.32
RGP1-201ENST00000378078 C15orf53Q8NAA6 179 aa13.02□□□□□ -0.32
RGP1-201ENST00000378078 RNF183Q96D59 192 aa13.02□□□□□ -0.32
RGP1-201ENST00000378078 SHISA9B4DS77 424 aa13.02□□□□□ -0.33
RGP1-201ENST00000378078 OOSP1A8MZH6 123 aa13.02□□□□□ -0.33
RGP1-201ENST00000378078 SEM1Q6ZVN7 128 aa13.02□□□□□ -0.33
RGP1-201ENST00000378078 IGLL5B9A064 214 aa13.02□□□□□ -0.33
RGP1-201ENST00000378078 C2orf66Q6UXQ4 117 aa13.02□□□□□ -0.33
RGP1-201ENST00000378078 HEATR5AQ86XA9 2040 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 ETDCA0A1B0GVM5 59 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 TMEM75Q8N9X5 138 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 WIPF2Q8TF74 440 aaPredicted RBP13.01□□□□□ -0.33
RGP1-201ENST00000378078 IGLV3-32A0A0A0MS00 114 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 MAJINQ3KP22 176 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 MRPL51Q4U2R6 128 aaKnown RBP13.01□□□□□ -0.33
RGP1-201ENST00000378078 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 CADP27708 2225 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 PFN1P07737 140 aaKnown RBP13.01□□□□□ -0.33
RGP1-201ENST00000378078 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 PROP1O75360 226 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 WDR81Q562E7 1941 aa13.01□□□□□ -0.33
RGP1-201ENST00000378078 GYPEP15421 78 aa13□□□□□ -0.33
RGP1-201ENST00000378078 BOD1L2Q8IYS8 172 aa13□□□□□ -0.33
RGP1-201ENST00000378078 C1orf43Q9BWL3 253 aa13□□□□□ -0.33
RGP1-201ENST00000378078 LINC01549A6NIU2 74 aa13□□□□□ -0.33
RGP1-201ENST00000378078 HOXB4P17483 251 aaPredicted RBP13□□□□□ -0.33
RGP1-201ENST00000378078 ZFP36P26651 326 aaKnown RBP13□□□□□ -0.33
RGP1-201ENST00000378078 ZNF134P52741 427 aa13□□□□□ -0.33
RGP1-201ENST00000378078 Q6ZS92 163 aa13□□□□□ -0.33
RGP1-201ENST00000378078 LMO1P25800 156 aa12.99□□□□□ -0.33
RGP1-201ENST00000378078 FANCD2OSQ96PS1 177 aa12.99□□□□□ -0.33
RGP1-201ENST00000378078 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
RGP1-201ENST00000378078 GP9P14770 177 aa12.99□□□□□ -0.33
RGP1-201ENST00000378078 FGF16O43320 207 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 389.5 ms