RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 CXCL1P09341 107 aa10.54□□□□□ -0.72
SLC44A1-202ENST00000374723 Q6P435 159 aa10.54□□□□□ -0.72
SLC44A1-202ENST00000374723 Q6ZS92 163 aa10.54□□□□□ -0.72
SLC44A1-202ENST00000374723 CACNA1HO95180 2353 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 CDKN1BP46527 198 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 Q9HAA7 133 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 SIPA1L1O43166 1804 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 MST1P26927 711 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 Q86TA4 180 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 IGHV1OR15-1A0A075B7D0 117 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 J3QLI3 93 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 NDUFB8O95169 186 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 MPZP25189 248 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 BTCP35070 178 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 CT83Q5H943 113 aa10.53□□□□□ -0.72
SLC44A1-202ENST00000374723 RNASE2P10153 161 aaKnown RBP10.52□□□□□ -0.72
SLC44A1-202ENST00000374723 HLA-DRB4P13762 266 aa10.52□□□□□ -0.72
SLC44A1-202ENST00000374723 HGFACQ04756 655 aa10.52□□□□□ -0.72
SLC44A1-202ENST00000374723 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.72
SLC44A1-202ENST00000374723 HLA-DRB4X5D2U9 266 aa10.52□□□□□ -0.72
SLC44A1-202ENST00000374723 CLPSL1A2RUU4 121 aa10.52□□□□□ -0.72
SLC44A1-202ENST00000374723 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.72
SLC44A1-202ENST00000374723 IGKV1-39P01597 117 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 IGKV1D-39P04432 117 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 MED13Q9UHV7 2174 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 NLRC5Q86WI3 1866 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 A0A1W2PPI3 338 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 UBE2CO00762 179 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 RPL18AQ02543 176 aaKnown RBP10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 IGHG4P01861 327 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
SLC44A1-202ENST00000374723 PLXNA3P51805 1871 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 ADAMTS9Q9P2N4 1935 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 G3V318 75 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 PFN1P07737 140 aaKnown RBP10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 NMSQ5H8A3 153 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 C8orf86Q6ZUL3 223 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 ZNRD1Q9P1U0 126 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 TMEM14EPQ6UXP3 125 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 MLANAQ16655 118 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 C9orf153Q5TBE3 101 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 HIST3H2BBQ8N257 126 aa10.51□□□□□ -0.73
SLC44A1-202ENST00000374723 TRAV1-1A0A0B4J248 108 aa10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 J3QRE1 110 aa10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 TNRC6AQ8NDV7 1962 aaKnown RBP10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 MORN5Q5VZ52 161 aa10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 ADAMTSL5Q6ZMM2 481 aa10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 C15orf62A8K5M9 175 aa10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 FNDC10F2Z333 226 aa10.5□□□□□ -0.73
SLC44A1-202ENST00000374723 LYPD3O95274 346 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 EGR2P11161 476 aaPredicted RBP10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 TRBV24-1A0A075B6N3 115 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 A0A0J9YY99 117 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 STPG4Q8N801 248 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 SLAQ13239 276 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 LINC00479Q96M42 142 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 PNRC2Q9NPJ4 139 aaKnown RBP10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 LY96Q9Y6Y9 160 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 IGHV1-24A0A0C4DH33 117 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 GFI1Q99684 422 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 MRPL27Q9P0M9 148 aaKnown RBP10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 XCL1P47992 114 aa10.49□□□□□ -0.73
SLC44A1-202ENST00000374723 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 TRAV26-2A0A0B4J265 109 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 NDUFA4O00483 81 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 MED12LQ86YW9 2145 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 C3orf79P0CE67 100 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 CSRP3P50461 194 aa10.48□□□□□ -0.73
SLC44A1-202ENST00000374723 TRBV6-6A0A0A6YYG2 114 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 ZNF134P52741 427 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 REG4Q9BYZ8 158 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 CHKB-CPT1BH3BT56 60 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 C2orf66Q6UXQ4 117 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 BUB3O43684 328 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 PRSS46E5RG02 174 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 TEX36Q5VZQ5 186 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 FGF16O43320 207 aa10.47□□□□□ -0.73
SLC44A1-202ENST00000374723 A0A1B0GW64 132 aa10.46□□□□□ -0.73
SLC44A1-202ENST00000374723 LHFPL1Q86WI0 220 aa10.46□□□□□ -0.73
SLC44A1-202ENST00000374723 Q6ZQT7 251 aa10.46□□□□□ -0.73
SLC44A1-202ENST00000374723 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.73
SLC44A1-202ENST00000374723 C1orf194Q5T5A4 169 aa10.46□□□□□ -0.73
SLC44A1-202ENST00000374723 ZNF503Q96F45 646 aa10.46□□□□□ -0.73
SLC44A1-202ENST00000374723 HERVK_113P63121 156 aa10.46□□□□□ -0.74
SLC44A1-202ENST00000374723 CFHR4Q92496 578 aa10.46□□□□□ -0.74
SLC44A1-202ENST00000374723 KIAA1671Q9BY89 1806 aa10.46□□□□□ -0.74
SLC44A1-202ENST00000374723 CCL24O00175 119 aa10.46□□□□□ -0.74
SLC44A1-202ENST00000374723 ZNF362Q5T0B9 420 aaPredicted RBP10.46□□□□□ -0.74
SLC44A1-202ENST00000374723 C2orf16Q68DN1 1984 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms