RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 TMEM126AQ9H061 195 aa12.56□□□□□ -0.4
FBXO28-201ENST00000366862 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
FBXO28-201ENST00000366862 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
FBXO28-201ENST00000366862 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
FBXO28-201ENST00000366862 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
FBXO28-201ENST00000366862 TSC2P49815 1807 aa12.56□□□□□ -0.4
FBXO28-201ENST00000366862 KLRD1Q13241 179 aa12.56□□□□□ -0.4
FBXO28-201ENST00000366862 TRBV25-1A0A075B6N4 114 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 LINC00527Q9UJ94 153 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 TRAV26-2A0A0B4J265 109 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 MDS2Q8NDY4 140 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 C17orf58Q2M2W7 97 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 RHPN1-AS1Q9BWJ2 59 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 SVILO95425 2214 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 LTBRP36941 435 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 RHODO00212 210 aa12.55□□□□□ -0.4
FBXO28-201ENST00000366862 EFNA4P52798 201 aa12.54□□□□□ -0.4
FBXO28-201ENST00000366862 WT1-ASQ06250 92 aa12.54□□□□□ -0.4
FBXO28-201ENST00000366862 SMIM20Q8N5G0 67 aa12.54□□□□□ -0.4
FBXO28-201ENST00000366862 LINC00311Q8N616 119 aa12.54□□□□□ -0.4
FBXO28-201ENST00000366862 FAM110DQ8TAY7 271 aaPredicted RBP12.54□□□□□ -0.4
FBXO28-201ENST00000366862 LTBP1Q14766 1721 aa12.54□□□□□ -0.4
FBXO28-201ENST00000366862 GATA4P43694 442 aa12.54□□□□□ -0.4
FBXO28-201ENST00000366862 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
FBXO28-201ENST00000366862 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
FBXO28-201ENST00000366862 WDR86Q86TI4 376 aa12.53□□□□□ -0.4
FBXO28-201ENST00000366862 Q8TCH9 128 aa12.53□□□□□ -0.4
FBXO28-201ENST00000366862 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
FBXO28-201ENST00000366862 C8orf86Q6ZUL3 223 aa12.53□□□□□ -0.4
FBXO28-201ENST00000366862 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
FBXO28-201ENST00000366862 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.4
FBXO28-201ENST00000366862 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.4
FBXO28-201ENST00000366862 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.4
FBXO28-201ENST00000366862 LYPD2Q6UXB3 125 aa12.52□□□□□ -0.4
FBXO28-201ENST00000366862 MBD3L2Q8NHZ7 208 aaPredicted RBP12.52□□□□□ -0.4
FBXO28-201ENST00000366862 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.4
FBXO28-201ENST00000366862 TRAV13-2A0A0B4J235 113 aa12.52□□□□□ -0.4
FBXO28-201ENST00000366862 INSP01308 110 aa12.52□□□□□ -0.4
FBXO28-201ENST00000366862 SRSF2Q01130 221 aaKnown RBP12.52□□□□□ -0.4
FBXO28-201ENST00000366862 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.4
FBXO28-201ENST00000366862 TEN1Q86WV5 123 aa12.52□□□□□ -0.41
FBXO28-201ENST00000366862 ARHGEF17Q96PE2 2063 aaPredicted RBP12.52□□□□□ -0.41
FBXO28-201ENST00000366862 TET1Q8NFU7 2136 aa12.52□□□□□ -0.41
FBXO28-201ENST00000366862 IGHG3P01860 377 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 WISP1O95388 367 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 CRYBA4P53673 196 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 ZNF493Q6ZR52 646 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 SS18Q15532 418 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 ZNRD1Q9P1U0 126 aa12.51□□□□□ -0.41
FBXO28-201ENST00000366862 IGF2BP2-AS1Q96M15 143 aa12.5□□□□□ -0.41
FBXO28-201ENST00000366862 PRSS29PA6NIE9 313 aa12.5□□□□□ -0.41
FBXO28-201ENST00000366862 RBMY1FQ15415 496 aaKnown RBP12.5□□□□□ -0.41
FBXO28-201ENST00000366862 SSC4DQ8WTU2 575 aa12.5□□□□□ -0.41
FBXO28-201ENST00000366862 HTN3P15516 51 aa12.5□□□□□ -0.41
FBXO28-201ENST00000366862 LYPD6Q86Y78 171 aa12.5□□□□□ -0.41
FBXO28-201ENST00000366862 TMEM219Q86XT9 240 aa12.5□□□□□ -0.41
FBXO28-201ENST00000366862 FANCMQ8IYD8 2048 aa12.5□□□□□ -0.41
FBXO28-201ENST00000366862 DKK1O94907 266 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 LINC00173Q6ZV60 143 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 C3orf36Q3SXR2 165 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 TMEM258P61165 79 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 FOXI1Q12951 378 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 ANXA2RQ3ZCQ2 193 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 SDK2Q58EX2 2172 aa12.49□□□□□ -0.41
FBXO28-201ENST00000366862 ZNF134P52741 427 aa12.48□□□□□ -0.41
FBXO28-201ENST00000366862 WFDC2Q14508 124 aa12.48□□□□□ -0.41
FBXO28-201ENST00000366862 PLXNA4Q9HCM2 1894 aa12.48□□□□□ -0.41
FBXO28-201ENST00000366862 SYNJ2BPP57105 145 aa12.48□□□□□ -0.41
FBXO28-201ENST00000366862 Q6ZR03 302 aa12.48□□□□□ -0.41
FBXO28-201ENST00000366862 IGHV1-69DA0A0B4J2H0 117 aa12.47□□□□□ -0.41
FBXO28-201ENST00000366862 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
FBXO28-201ENST00000366862 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
FBXO28-201ENST00000366862 INS-IGF2F8WCM5 200 aa12.47□□□□□ -0.41
FBXO28-201ENST00000366862 Q6ZSR3 168 aa12.47□□□□□ -0.41
FBXO28-201ENST00000366862 PRDM6Q9NQX0 595 aa12.47□□□□□ -0.41
FBXO28-201ENST00000366862 FXYD2P54710 66 aa12.47□□□□□ -0.41
FBXO28-201ENST00000366862 J3KT08 172 aa12.46□□□□□ -0.41
FBXO28-201ENST00000366862 PHF3Q92576 2039 aaKnown RBP12.46□□□□□ -0.41
FBXO28-201ENST00000366862 IGHV1OR15-1A0A075B7D0 117 aa12.46□□□□□ -0.41
FBXO28-201ENST00000366862 A0A1W2PRX2 142 aa12.46□□□□□ -0.41
FBXO28-201ENST00000366862 MRAPQ8TCY5 172 aa12.46□□□□□ -0.41
FBXO28-201ENST00000366862 HAMPP81172 84 aa12.46□□□□□ -0.41
FBXO28-201ENST00000366862 RHOHQ15669 191 aa12.46□□□□□ -0.41
FBXO28-201ENST00000366862 F8WEM9 126 aa12.46□□□□□ -0.42
FBXO28-201ENST00000366862 IGHV3-53P01767 116 aa12.46□□□□□ -0.42
FBXO28-201ENST00000366862 RBAKDNA6NC62 111 aa12.45□□□□□ -0.42
FBXO28-201ENST00000366862 HERVK_113P63121 156 aa12.45□□□□□ -0.42
FBXO28-201ENST00000366862 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
FBXO28-201ENST00000366862 TEX36Q5VZQ5 186 aa12.45□□□□□ -0.42
FBXO28-201ENST00000366862 EGR2P11161 476 aaPredicted RBP12.45□□□□□ -0.42
FBXO28-201ENST00000366862 TRAV26-1A0A087WT03 109 aa12.45□□□□□ -0.42
FBXO28-201ENST00000366862 PRSS47A8MTI9 375 aa12.44□□□□□ -0.42
FBXO28-201ENST00000366862 OVOL3O00110 214 aa12.44□□□□□ -0.42
FBXO28-201ENST00000366862 ATOX1O00244 68 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms