RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 LINC01549A6NIU2 74 aa6.81□□□□□ -1.32
CD46-206ENST00000360212 RHODO00212 210 aa6.81□□□□□ -1.32
CD46-206ENST00000360212 CECR9P0C854 216 aa6.81□□□□□ -1.32
CD46-206ENST00000360212 IFITM1P13164 125 aa6.81□□□□□ -1.32
CD46-206ENST00000360212 GLRXP35754 106 aa6.81□□□□□ -1.32
CD46-206ENST00000360212 EFNA4P52798 201 aa6.81□□□□□ -1.32
CD46-206ENST00000360212 RAB9BQ9NP90 201 aa6.81□□□□□ -1.32
CD46-206ENST00000360212 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 PATE3B3GLJ2 98 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 HLA-DRB4P13762 266 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 KLF17Q5JT82 389 aaPredicted RBP6.8□□□□□ -1.32
CD46-206ENST00000360212 ZCCHC24Q8N2G6 241 aaKnown RBP6.8□□□□□ -1.32
CD46-206ENST00000360212 HLA-DRB4X5D2U9 266 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
CD46-206ENST00000360212 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
CD46-206ENST00000360212 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
CD46-206ENST00000360212 IGFBPL1Q8WX77 278 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 NRGNQ92686 78 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 HIGD1AQ9Y241 93 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 CENPVL3A0A0U1RRI6 287 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 H7C2G1 150 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 CNTFRP26992 372 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 MEOX1P50221 254 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 IL11RAQ14626 422 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 PCSK5Q92824 1860 aa6.8□□□□□ -1.32
CD46-206ENST00000360212 SRRM5B3KS81 715 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 SPRY2O43597 315 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 SNCGO76070 127 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 DPM2O94777 84 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 ORM1P02763 201 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 SUB1P53999 127 aaKnown RBP eCLIP6.79□□□□□ -1.323e-6■□□□□ 8.1
CD46-206ENST00000360212 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 TRAV4A0A0B4J268 109 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 IGHV3-35A0A0C4DH35 117 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 IL4P05112 153 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 SRD5A1P18405 259 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 IGFBP4P22692 258 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 ATP6V0E2Q8NHE4 81 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 PPDPFLQ8WWR9 84 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 RPEQ96AT9 228 aa6.79□□□□□ -1.32
CD46-206ENST00000360212 SLC25A39Q9BZJ4 359 aaPredicted RBP6.79□□□□□ -1.32
CD46-206ENST00000360212 HOXA3O43365 443 aaPredicted RBP6.78□□□□□ -1.32
CD46-206ENST00000360212 SH2D1AO60880 128 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 EMP1P54849 157 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 MRPL23Q16540 153 aaKnown RBP6.78□□□□□ -1.32
CD46-206ENST00000360212 ATP1A1-AS1Q5TC04 95 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 CFAP126Q5VTH2 177 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 TMEM105Q8N8V8 129 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 SPRR3Q9UBC9 169 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 LRBAP50851 2863 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 SMIM9A6NGZ8 99 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 FCN3O75636 299 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 SRSF9Q13242 221 aaKnown RBP eCLIP6.78□□□□□ -1.32
CD46-206ENST00000360212 MORN3Q6PF18 240 aaPredicted RBP6.78□□□□□ -1.32
CD46-206ENST00000360212 SPRY4Q9C004 299 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 SAP25Q8TEE9 199 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 VKORC1Q9BQB6 163 aa6.78□□□□□ -1.32
CD46-206ENST00000360212 ZNF688P0C7X2 276 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 SCGB1C2P0DMR2 95 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 EGR2P11161 476 aaPredicted RBP6.77□□□□□ -1.33
CD46-206ENST00000360212 WT1P19544 449 aaPredicted RBP6.77□□□□□ -1.33
CD46-206ENST00000360212 FBXL15Q9H469 300 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 NCBP2LA6PVI3 153 aaKnown RBP6.77□□□□□ -1.33
CD46-206ENST00000360212 CRLF1O75462 422 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 TNFRSF6BO95407 300 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 HLA-DMBP28068 263 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 PAX8Q06710 450 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 LPAL2Q16609 132 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 POU2AF1Q16633 256 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 SMRP1Q8NCR6 262 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 KLHL30-AS1Q8NEE0 82 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 DLX4Q92988 240 aaPredicted RBP6.77□□□□□ -1.33
CD46-206ENST00000360212 HIGD1BQ9P298 99 aa6.77□□□□□ -1.33
CD46-206ENST00000360212 LINC00694P0DN24 101 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 CGB3P0DN86 165 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 CGB7P0DN87 165 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 ZNF80P51504 273 aaPredicted RBP6.76□□□□□ -1.33
CD46-206ENST00000360212 CCL8P80075 99 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 SRSF1Q07955 248 aaKnown RBP eCLIP6.76□□□□□ -1.334e-6■■■□□ 17.3
CD46-206ENST00000360212 C1orf162Q8NEQ5 155 aaPredicted RBP6.76□□□□□ -1.33
CD46-206ENST00000360212 PROCRQ9UNN8 238 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 AKAP6Q13023 2319 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 TMEM262E9PQX1 116 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 K7ESF4 209 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 M0R1B8 84 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 Q6ZQT7 251 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 THAP8Q8NA92 274 aa6.76□□□□□ -1.33
CD46-206ENST00000360212 MRPS17Q9Y2R5 130 aaKnown RBP6.76□□□□□ -1.33
CD46-206ENST00000360212 SPTBN1Q01082 2364 aaKnown RBP6.76□□□□□ -1.33
CD46-206ENST00000360212 TRGV5A0A0B4J1U4 118 aa6.75□□□□□ -1.33
CD46-206ENST00000360212 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
CD46-206ENST00000360212 IGHV3-23P01764 117 aa6.75□□□□□ -1.33
CD46-206ENST00000360212 THBDP07204 575 aa6.75□□□□□ -1.33
CD46-206ENST00000360212 PPP1R27Q86WC6 154 aa6.75□□□□□ -1.33
CD46-206ENST00000360212 TEN1Q86WV5 123 aa6.75□□□□□ -1.33
CD46-206ENST00000360212 RASL11BQ9BPW5 248 aa6.75□□□□□ -1.33
CD46-206ENST00000360212 RPL7P18124 248 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms