RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FAM24BQ8N5W8 94 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 NHLRC2Q8NBF2 726 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 BIN3Q9NQY0 253 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 OSTCQ9NRP0 149 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 K7EQG2 157 aa13.62□□□□□ -0.23
SMARCD3-202ENST00000356800 PF4P02776 101 aa13.62□□□□□ -0.23
SMARCD3-202ENST00000356800 ERVFC1-1P60608 527 aa13.62□□□□□ -0.23
SMARCD3-202ENST00000356800 FAM231DQ6ZW35 169 aa13.62□□□□□ -0.23
SMARCD3-202ENST00000356800 IMMP2LQ96T52 175 aa13.62□□□□□ -0.23
SMARCD3-202ENST00000356800 ELOBQ15370 118 aa13.61□□□□□ -0.23
SMARCD3-202ENST00000356800 CD300EQ496F6 205 aaPredicted RBP13.61□□□□□ -0.23
SMARCD3-202ENST00000356800 PFN1P07737 140 aaKnown RBP13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 IBA57Q5T440 356 aaKnown RBP13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 SPATA3Q8NHX4 192 aa13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 VGLL1Q99990 258 aa13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 ZNF747Q9BV97 191 aa13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 RNASE7Q9H1E1 156 aaKnown RBP13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 SORL1Q92673 2214 aa13.6□□□□□ -0.23
SMARCD3-202ENST00000356800 DEFB1P60022 68 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 COX8CQ7Z4L0 72 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 ZNF738Q8NE65 137 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 V9GYV3 84 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 IZUMO1RA6ND01 250 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 S100PP25815 95 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 SAPCD1Q5SSQ6 148 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 RBPMS2Q6ZRY4 209 aaKnown RBP13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 ASCL2Q99929 193 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 ZNF492Q9P255 531 aa13.59□□□□□ -0.23
SMARCD3-202ENST00000356800 SAP30O75446 220 aa13.58□□□□□ -0.24
SMARCD3-202ENST00000356800 ID1P41134 155 aa13.58□□□□□ -0.24
SMARCD3-202ENST00000356800 ERCC8Q13216 396 aa13.58□□□□□ -0.24
SMARCD3-202ENST00000356800 TRBV24-1A0A075B6N3 115 aa13.57□□□□□ -0.24
SMARCD3-202ENST00000356800 ZNF688P0C7X2 276 aa13.57□□□□□ -0.24
SMARCD3-202ENST00000356800 PAFAH1B2P68402 229 aa13.57□□□□□ -0.24
SMARCD3-202ENST00000356800 NUDT10Q8NFP7 164 aa13.57□□□□□ -0.24
SMARCD3-202ENST00000356800 TMEM158Q8WZ71 300 aa13.57□□□□□ -0.24
SMARCD3-202ENST00000356800 NUDT11Q96G61 164 aa13.57□□□□□ -0.24
SMARCD3-202ENST00000356800 PPP1R14DQ9NXH3 145 aa13.57□□□□□ -0.24
SMARCD3-202ENST00000356800 STAB1Q9NY15 2570 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 C19orf71A6NCJ1 209 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 ZNF705DP0CH99 300 aaPredicted RBP13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 ZNF705BP0CI00 300 aaPredicted RBP13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 KCNIP4Q6PIL6 250 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 C9orf47Q6ZRZ4 202 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 PRR25Q96S07 402 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 PYGO2Q9BRQ0 406 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 IL36BQ9NZH7 164 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 TRAV2A0A0B4J234 112 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 TRAV25A0A0B4J276 109 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 IGLV1-51P01701 117 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 RAB5AP20339 215 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 LINC00322Q6ZN03 302 aaPredicted RBP13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 Q8TAT8 98 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 AGPAT4-IT1Q9H0P7 198 aa13.56□□□□□ -0.24
SMARCD3-202ENST00000356800 TGIF2-C20orf24A0A0A6YYL0 155 aa13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 ZNF705GA8MUZ8 300 aaPredicted RBP13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 F6UB75 175 aa13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 CXCL1P09341 107 aa13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 PSMG4Q5JS54 123 aa13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 C3orf56Q8N813 242 aa13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 ZC2HC1AQ96GY0 325 aa13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
SMARCD3-202ENST00000356800 SNRPD3P62318 126 aaKnown RBP13.54□□□□□ -0.24
SMARCD3-202ENST00000356800 C12orf54Q6X4T0 127 aa13.54□□□□□ -0.24
SMARCD3-202ENST00000356800 SPAG8Q99932 426 aaPredicted RBP13.54□□□□□ -0.24
SMARCD3-202ENST00000356800 NDFIP1Q9BT67 221 aa13.54□□□□□ -0.24
SMARCD3-202ENST00000356800 GPR61Q9BZJ8 451 aa13.54□□□□□ -0.24
SMARCD3-202ENST00000356800 COL6A5A8TX70 2615 aa13.54□□□□□ -0.24
SMARCD3-202ENST00000356800 TRRAPQ9Y4A5 3859 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 GATCO43716 136 aaKnown RBP13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 ZNF138P52744 262 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 CT83Q5H943 113 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 TMEM78Q5T7P6 136 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 OR8A1Q8NGG7 326 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 DAZAP1Q96EP5 407 aaKnown RBP13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 AGRNO00468 2067 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 TRAV9-1A0A075B6T8 112 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 P01737 135 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 CT45A10P0DMU9 189 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 FAM3BP58499 235 aaPredicted RBP13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 OR10J6PQ8NGY7 276 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 BTF3L4Q96K17 158 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 FAM210BQ96KR6 192 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 C8orf49Q96NF6 230 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 LENEPQ9Y5L5 61 aa13.53□□□□□ -0.24
SMARCD3-202ENST00000356800 CRIP1P50238 77 aa13.52□□□□□ -0.25
SMARCD3-202ENST00000356800 GDF5OSQ5U4N7 250 aa13.52□□□□□ -0.25
SMARCD3-202ENST00000356800 SHISA2Q6UWI4 295 aa13.52□□□□□ -0.25
SMARCD3-202ENST00000356800 OR4B1Q8NGF8 309 aa13.52□□□□□ -0.25
SMARCD3-202ENST00000356800 RPP21Q9H633 154 aaKnown RBP13.52□□□□□ -0.25
SMARCD3-202ENST00000356800 TMA7Q9Y2S6 64 aaKnown RBP13.52□□□□□ -0.25
SMARCD3-202ENST00000356800 A0A1W2PPQ1 181 aa13.51□□□□□ -0.25
SMARCD3-202ENST00000356800 SMIM27A0A1W2PRY6 76 aa13.51□□□□□ -0.25
SMARCD3-202ENST00000356800 OR4C46A6NHA9 309 aa13.51□□□□□ -0.25
SMARCD3-202ENST00000356800 HIST1H1AQ02539 215 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms