RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 NUP35Q8NFH5 326 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 ROS1P08922 2347 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 LINC00479Q96M42 142 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 IGKV1-27A0A075B6S5 117 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 A0A1W2PPI3 338 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 RNASE2P10153 161 aaKnown RBP9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 TIRAPP58753 221 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 TRAV9-1A0A075B6T8 112 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 ID3Q02535 119 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 MPV17L2Q567V2 206 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 C14orf132Q9NPU4 83 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 UBL5Q9BZL1 73 aa9.88□□□□□ -0.83
TRIOBP-202ENST00000344404 HLA-DRB4P13762 266 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 Q6ZS92 163 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 HLA-DRB4X5D2U9 266 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 IGHV1-69DA0A0B4J2H0 117 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 SRRM5B3KS81 715 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 IGHV1-69P01742 117 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 TRACP01848 142 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 LINC00473A8K010 186 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 LINC00271P0C7V0 271 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 RNF126Q9BV68 326 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 CD200R1LQ6Q8B3 271 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 K7EM74 188 aa9.87□□□□□ -0.83
TRIOBP-202ENST00000344404 IGLV10-54A0A075B6I4 117 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 ATRAIDQ6UW56 229 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 EML6Q6ZMW3 1958 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 IGKV1D-17A0A075B6S4 117 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 I3L3M4 83 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 STPG4Q8N801 248 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 DEFB4AO15263 64 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 C8orf31Q8N9H6 132 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 KLHDC3Q9BQ90 382 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 DEFB113Q30KQ7 82 aa9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 IGFBP3P17936 291 aaPredicted RBP9.86□□□□□ -0.83
TRIOBP-202ENST00000344404 KIR3DS1Q14943 382 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 TEX36Q5VZQ5 186 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 PRSS57Q6UWY2 283 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 TNRC6AQ8NDV7 1962 aaKnown RBP9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 IGLV3-12A0A075B6K2 115 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 UBE2AP49459 152 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 RNF144BQ7Z419 303 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 APRG1Q8IVJ8 170 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 NTF4P34130 210 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 TRGV9Q99603 122 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 WFDC9Q8NEX5 89 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 C8orf86Q6ZUL3 223 aa9.85□□□□□ -0.83
TRIOBP-202ENST00000344404 IGHV4-59P01825 116 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 TMEM213A2RRL7 107 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 ZC2HC1BQ5TFG8 222 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 ADAMTSL5Q6ZMM2 481 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 GLRX5Q86SX6 157 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 ETDCA0A1B0GVM5 59 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 SIP14410 1827 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 A0A1B0GUS0 222 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 CCL24O00175 119 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 SPRY2O43597 315 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 FLVCR1-AS1Q8TAF5 88 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 NDUFB8O95169 186 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 FBLIM1Q8WUP2 373 aa9.84□□□□□ -0.83
TRIOBP-202ENST00000344404 RNF222A6NCQ9 220 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 A0A087WWC5 75 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 LMO1P25800 156 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 CEP192Q8TEP8 1941 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 MED13Q9UHV7 2174 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 SRSF2Q01130 221 aaKnown RBP9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 DEFB112Q30KQ8 113 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 SPATA25Q9BR10 227 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 CRYGSP22914 178 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 FANCD2OSQ96PS1 177 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 AGMATQ9BSE5 352 aa9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 RBM3P98179 157 aaKnown RBP9.83□□□□□ -0.84
TRIOBP-202ENST00000344404 ARHGAP21Q5T5U3 1957 aa9.82□□□□□ -0.84
TRIOBP-202ENST00000344404 LINC00114Q6XXX2 140 aa9.82□□□□□ -0.84
TRIOBP-202ENST00000344404 NOTCH4Q99466 2003 aa9.82□□□□□ -0.84
TRIOBP-202ENST00000344404 ZNF124Q15973 351 aa9.82□□□□□ -0.84
TRIOBP-202ENST00000344404 HIST2H2BDQ6DRA6 164 aa9.82□□□□□ -0.84
TRIOBP-202ENST00000344404 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
TRIOBP-202ENST00000344404 TNCP24821 2201 aa9.82□□□□□ -0.84
TRIOBP-202ENST00000344404 SVIPQ8NHG7 77 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 IGHV2-70DA0A0C4DH43 119 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 LINC01549A6NIU2 74 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 CCL18P55774 89 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 IGHV1OR15-1A0A075B7D0 117 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 CSRP3P50461 194 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 C9orf47Q6ZRZ4 202 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 IFITM2Q01629 132 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 ARTNQ5T4W7 220 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 RNF183Q96D59 192 aa9.81□□□□□ -0.84
TRIOBP-202ENST00000344404 CXCL1P09341 107 aa9.8□□□□□ -0.84
TRIOBP-202ENST00000344404 LAIR2Q6ISS4 152 aa9.8□□□□□ -0.84
TRIOBP-202ENST00000344404 TSSC4Q9Y5U2 329 aaPredicted RBP9.8□□□□□ -0.84
TRIOBP-202ENST00000344404 RIF1Q5UIP0 2472 aaKnown RBP9.8□□□□□ -0.84
TRIOBP-202ENST00000344404 SLURP1P55000 103 aa9.8□□□□□ -0.84
TRIOBP-202ENST00000344404 SEC61GP60059 68 aa9.8□□□□□ -0.84
TRIOBP-202ENST00000344404 IFI6P09912 130 aa9.8□□□□□ -0.84
TRIOBP-202ENST00000344404 NBASA2RRP1 2371 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms