RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PMCHL2Q9BQD1 86 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 TMEM208Q9BTX3 173 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 FLNCQ14315 2725 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 CSMD2Q7Z408 3487 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 GOSR1O95249 250 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 PIFOQ8TCI5 191 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 OR5AL1P0C617 328 aa16.49■□□□□ 0.23
CCDC38-201ENST00000344280 PRSS3P2Q8NHM4 247 aa16.49■□□□□ 0.23
CCDC38-201ENST00000344280 A0A087X0K7 114 aa16.49■□□□□ 0.23
CCDC38-201ENST00000344280 IGHV4-61A0A0C4DH41 118 aa16.49■□□□□ 0.23
CCDC38-201ENST00000344280 PAX8Q06710 450 aa16.49■□□□□ 0.23
CCDC38-201ENST00000344280 FER1L6-AS1Q8NA97 138 aa16.49■□□□□ 0.23
CCDC38-201ENST00000344280 MAP1LC3CQ9BXW4 147 aa16.49■□□□□ 0.23
CCDC38-201ENST00000344280 SMKR1H3BMG3 65 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 MRPL51Q4U2R6 128 aaKnown RBP16.48■□□□□ 0.23
CCDC38-201ENST00000344280 COL5A1-AS1Q5SY13 56 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 IL17RELQ6ZVW7 336 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 EEF1AKMT3Q96AZ1 226 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 MSRB1Q9NZV6 116 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 A0A096LNJ9 63 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 C20orf202A1L168 122 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 ORM1P02763 201 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 IGLC6P0CF74 106 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 TWIST1Q15672 202 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 FA2HQ7L5A8 372 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 SIGLEC8Q9NYZ4 499 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 U3KQK5 164 aa16.48■□□□□ 0.23
CCDC38-201ENST00000344280 TRAV40A0A0B4J280 105 aa16.47■□□□□ 0.23
CCDC38-201ENST00000344280 BMI1P35226 326 aa16.47■□□□□ 0.23
CCDC38-201ENST00000344280 HINT1P49773 126 aaPredicted RBP16.47■□□□□ 0.23
CCDC38-201ENST00000344280 PRELID3AQ96N28 172 aa16.47■□□□□ 0.23
CCDC38-201ENST00000344280 TRAV8-2A0A0B4J237 113 aa16.47■□□□□ 0.23
CCDC38-201ENST00000344280 FXYD7P58549 80 aa16.47■□□□□ 0.23
CCDC38-201ENST00000344280 HSPB8Q9UJY1 196 aa16.47■□□□□ 0.23
CCDC38-201ENST00000344280 FBLL1A6NHQ2 334 aaKnown RBP16.46■□□□□ 0.23
CCDC38-201ENST00000344280 NCR2O95944 276 aa16.46■□□□□ 0.23
CCDC38-201ENST00000344280 ZNF747Q9BV97 191 aa16.46■□□□□ 0.23
CCDC38-201ENST00000344280 MRPS16Q9Y3D3 137 aaKnown RBP16.46■□□□□ 0.23
CCDC38-201ENST00000344280 TRBV7-1A0A0A6YYK4 115 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 DLEU1O43261 78 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 DMRTA1Q5VZB9 504 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 MOB4Q9Y3A3 225 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 CRYBG3Q68DQ2 2970 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 TRAV41A0A0B4J266 112 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 IGHV1-69DA0A0B4J2H0 117 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 IGHV1-69P01742 117 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 S100A7P31151 101 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 RAB9AP51151 201 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 PET117Q6UWS5 81 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 ORMDL3Q8N138 153 aa16.45■□□□□ 0.22
CCDC38-201ENST00000344280 USP9XQ93008 2570 aaPredicted RBP16.45■□□□□ 0.22
CCDC38-201ENST00000344280 PPIFP30405 207 aaKnown RBP16.44■□□□□ 0.22
CCDC38-201ENST00000344280 ATP5G2Q06055 141 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 C19orf54Q5BKX5 351 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 TMEM191AQ9H0A3 160 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 AGPAT4-IT1Q9H0P7 198 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 GOLT1BQ9Y3E0 138 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 FABP5P3A8MUU1 101 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 NPSP0C0P6 89 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 IGHV4-38-2P0DP08 117 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 OR10AG1Q8NH19 301 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 METTL26Q96S19 204 aa16.44■□□□□ 0.22
CCDC38-201ENST00000344280 GAS8-AS1O95177 125 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 RPS20P60866 119 aaKnown RBP16.43■□□□□ 0.22
CCDC38-201ENST00000344280 UTP20O75691 2785 aaKnown RBP16.43■□□□□ 0.22
CCDC38-201ENST00000344280 NPYP01303 97 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 LINC01545Q5VT33 79 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 Q6ZQT7 251 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 C8orf86Q6ZUL3 223 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 SLC50A1Q9BRV3 221 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 ST20Q9HBF5 79 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 C11orf21Q9P2W6 132 aa16.43■□□□□ 0.22
CCDC38-201ENST00000344280 TRBV12-3P01733 135 aa16.42■□□□□ 0.22
CCDC38-201ENST00000344280 LY6EQ16553 131 aa16.42■□□□□ 0.22
CCDC38-201ENST00000344280 ANKRD39Q53RE8 183 aa16.42■□□□□ 0.22
CCDC38-201ENST00000344280 Q6ZVH6 145 aa16.42■□□□□ 0.22
CCDC38-201ENST00000344280 IGSF10Q6WRI0 2623 aa16.42■□□□□ 0.22
CCDC38-201ENST00000344280 U3KQE9 123 aa16.42■□□□□ 0.22
CCDC38-201ENST00000344280 CACNA1AO00555 2505 aa16.41■□□□□ 0.22
CCDC38-201ENST00000344280 IGKV3D-20A0A0C4DH25 116 aa16.41■□□□□ 0.22
CCDC38-201ENST00000344280 RBAKDNA6NC62 111 aa16.41■□□□□ 0.22
CCDC38-201ENST00000344280 CKS2P33552 79 aa16.41■□□□□ 0.22
CCDC38-201ENST00000344280 RNF185Q96GF1 192 aa16.41■□□□□ 0.22
CCDC38-201ENST00000344280 CCL19Q99731 98 aa16.41■□□□□ 0.22
CCDC38-201ENST00000344280 PIMREGQ9BSJ6 248 aa16.41■□□□□ 0.22
CCDC38-201ENST00000344280 TRGV3P03979 118 aa16.4■□□□□ 0.22
CCDC38-201ENST00000344280 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCDC38-201ENST00000344280 SRSF2Q01130 221 aaKnown RBP16.4■□□□□ 0.22
CCDC38-201ENST00000344280 LINC01559Q495D7 138 aa16.4■□□□□ 0.22
CCDC38-201ENST00000344280 CYB5R2Q6BCY4 276 aa16.4■□□□□ 0.22
CCDC38-201ENST00000344280 PRSS57Q6UWY2 283 aa16.4■□□□□ 0.22
CCDC38-201ENST00000344280 UNQ9165/PRO28630Q6UXU0 137 aa16.4■□□□□ 0.22
CCDC38-201ENST00000344280 C10orf105Q8TEF2 133 aa16.4■□□□□ 0.22
CCDC38-201ENST00000344280 DOPEY1Q5JWR5 2465 aa16.4■□□□□ 0.22
CCDC38-201ENST00000344280 OR8A1Q8NGG7 326 aa16.39■□□□□ 0.21
CCDC38-201ENST00000344280 CNFNQ9BYD5 112 aa16.39■□□□□ 0.21
CCDC38-201ENST00000344280 IGHV4-30-2A0A087WSY4 118 aa16.39■□□□□ 0.21
CCDC38-201ENST00000344280 SCRT2Q9NQ03 307 aa16.38■□□□□ 0.21
CCDC38-201ENST00000344280 MEGF9Q9H1U4 602 aa16.38■□□□□ 0.21
CCDC38-201ENST00000344280 HSBP1L1C9JCN9 74 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms