RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 FAM162BQ5T6X4 162 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 CLEC2AQ6UVW9 174 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 TRAV41A0A0B4J266 112 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 H3BUX3 64 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 ATP5G2Q06055 141 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 EEF1AKMT3Q96AZ1 226 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 C20orf144Q9BQM9 153 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 C2orf88Q9BSF0 95 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 APCP25054 2843 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 CLPSL1A2RUU4 121 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 BTF3P20290 206 aaKnown RBP7.99□□□□□ -1.13
LIMA1-201ENST00000341247 DEFB1P60022 68 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 BLCAPP62952 87 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 FAM106AQ4KMX7 169 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 Q6ZQT7 251 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 MSRB1Q9NZV6 116 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 CREBBPQ92793 2442 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 A1L4Q6 167 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 C2orf70A6NJV1 201 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 PAX8Q06710 450 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 TWIST1Q15672 202 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 IL17RELQ6ZVW7 336 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 PIFOQ8TCI5 191 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 MOB4Q9Y3A3 225 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 NCR2O95944 276 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 Q6ZN92 141 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 NF1P21359 2839 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 FAM231BA6NCW3 169 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 D6R8Y8 96 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 TFPI2P48307 235 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 RPL11P62913 178 aaKnown RBP7.98□□□□□ -1.13
LIMA1-201ENST00000341247 C16orf54Q6UWD8 224 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 PRSS3P2Q8NHM4 247 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 C10orf105Q8TEF2 133 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 METTL26Q96S19 204 aa7.98□□□□□ -1.13
LIMA1-201ENST00000341247 TLN2Q9Y4G6 2542 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 TCTAP57738 103 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 BBC3Q96PG8 261 aaPredicted RBP7.97□□□□□ -1.13
LIMA1-201ENST00000341247 KLK15Q9H2R5 256 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 ANKRD17O75179 2603 aaKnown RBP7.97□□□□□ -1.13
LIMA1-201ENST00000341247 PF4V1P10720 104 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 RAB4AP20338 218 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 TMEM95Q3KNT9 176 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 UNQ9165/PRO28630Q6UXU0 137 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
LIMA1-201ENST00000341247 TRBV6-1A0A0K0K1D8 114 aa7.96□□□□□ -1.13
LIMA1-201ENST00000341247 AVPP01185 164 aa7.96□□□□□ -1.13
LIMA1-201ENST00000341247 IFI27P40305 119 aaPredicted RBP7.96□□□□□ -1.13
LIMA1-201ENST00000341247 LOXL1Q08397 574 aaPredicted RBP7.96□□□□□ -1.13
LIMA1-201ENST00000341247 SAPCD1Q5SSQ6 148 aa7.96□□□□□ -1.13
LIMA1-201ENST00000341247 HIF1ANQ9NWT6 349 aa7.96□□□□□ -1.13
LIMA1-201ENST00000341247 hDV102S1A0JD36 115 aa7.96□□□□□ -1.13
LIMA1-201ENST00000341247 NDFIP1Q9BT67 221 aa7.96□□□□□ -1.13
LIMA1-201ENST00000341247 NIPBLQ6KC79 2804 aaeCLIP7.96□□□□□ -1.14
LIMA1-201ENST00000341247 SPRY2O43597 315 aa7.96□□□□□ -1.14
LIMA1-201ENST00000341247 ARL3P36405 182 aa7.96□□□□□ -1.14
LIMA1-201ENST00000341247 CTRLP40313 264 aa7.96□□□□□ -1.14
LIMA1-201ENST00000341247 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
LIMA1-201ENST00000341247 FER1L6-AS1Q8NA97 138 aa7.96□□□□□ -1.14
LIMA1-201ENST00000341247 OR4C46A6NHA9 309 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 TCAPO15273 167 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 IGLL1P15814 213 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 WFDC3Q8IUB2 231 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 AGPAT4-IT1Q9H0P7 198 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 SORL1Q92673 2214 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 SRD5A1P18405 259 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 HNRNPA3P51991 378 aaKnown RBP7.95□□□□□ -1.14
LIMA1-201ENST00000341247 NUTF2P61970 127 aaKnown RBP7.95□□□□□ -1.14
LIMA1-201ENST00000341247 C8orf86Q6ZUL3 223 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 AP5S1Q9NUS5 200 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 GAS8-AS1O95177 125 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 C16orf92Q96LL3 132 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 CHD6Q8TD26 2715 aa7.95□□□□□ -1.14
LIMA1-201ENST00000341247 TRBV7-1A0A0A6YYK4 115 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 SYS1-DBNDD2H3BUS1 97 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 SMAD7O15105 426 aaKnown RBP7.94□□□□□ -1.14
LIMA1-201ENST00000341247 PRELID3AQ96N28 172 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 IGF1P05019 195 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 MSMBP08118 114 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 OR8A1Q8NGG7 326 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 CHCHD1Q96BP2 118 aaKnown RBP7.94□□□□□ -1.14
LIMA1-201ENST00000341247 UQCR10Q9UDW1 63 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 NAV2Q8IVL1 2488 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 TRAV8-2A0A0B4J237 113 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 BMI1P35226 326 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 HINT1P49773 126 aaPredicted RBP7.94□□□□□ -1.14
LIMA1-201ENST00000341247 MRPL51Q4U2R6 128 aaKnown RBP7.94□□□□□ -1.14
LIMA1-201ENST00000341247 GLMPQ8WWB7 406 aa7.94□□□□□ -1.14
LIMA1-201ENST00000341247 TRAV9-2A0A087WT02 112 aa7.93□□□□□ -1.14
LIMA1-201ENST00000341247 CKS2P33552 79 aa7.93□□□□□ -1.14
LIMA1-201ENST00000341247 LBHQ53QV2 105 aaPredicted RBP7.93□□□□□ -1.14
LIMA1-201ENST00000341247 FABP5P3A8MUU1 101 aa7.93□□□□□ -1.14
LIMA1-201ENST00000341247 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
LIMA1-201ENST00000341247 EVI2AP22794 236 aa7.93□□□□□ -1.14
LIMA1-201ENST00000341247 FOXE3Q13461 319 aa7.93□□□□□ -1.14
LIMA1-201ENST00000341247 FAM104BQ5XKR9 115 aa7.93□□□□□ -1.14
LIMA1-201ENST00000341247 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms