RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CYB5R2Q6BCY4 276 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 MRPS16Q9Y3D3 137 aaKnown RBP13.69□□□□□ -0.22
LRCH3-201ENST00000334859 MAP1AP78559 2803 aaPredicted RBP13.68□□□□□ -0.22
LRCH3-201ENST00000334859 A0A087X0K7 114 aa13.68□□□□□ -0.22
LRCH3-201ENST00000334859 PET117Q6UWS5 81 aa13.68□□□□□ -0.22
LRCH3-201ENST00000334859 OR10AG1Q8NH19 301 aa13.68□□□□□ -0.22
LRCH3-201ENST00000334859 PMCHL2Q9BQD1 86 aa13.68□□□□□ -0.22
LRCH3-201ENST00000334859 TP73-AS1Q9UF72 201 aa13.68□□□□□ -0.22
LRCH3-201ENST00000334859 HSBP1L1C9JCN9 74 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 BRD3OSQ6XYD6 125 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 METTL26Q96S19 204 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 ST20Q9HBF5 79 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 TRBV7-1A0A0A6YYK4 115 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 KLK9Q2XQG4 91 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 MRPL51Q4U2R6 128 aaKnown RBP13.67□□□□□ -0.22
LRCH3-201ENST00000334859 KLK9Q9UKQ9 250 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 MOB4Q9Y3A3 225 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 CFAP46Q8IYW2 2715 aa13.67□□□□□ -0.22
LRCH3-201ENST00000334859 FAM106AQ4KMX7 169 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 SLC50A1Q9BRV3 221 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 SIGLEC8Q9NYZ4 499 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 VPS13CQ709C8 3753 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 TRAV40A0A0B4J280 105 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 DLEU1O43261 78 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 ATP5G2Q06055 141 aa13.66□□□□□ -0.22
LRCH3-201ENST00000334859 ZFHX3Q15911 3703 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 TRAV41A0A0B4J266 112 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 FABP5P3A8MUU1 101 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 IGLC6P0CF74 106 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 ZNF747Q9BV97 191 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 U3KQK5 164 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 SMKR1H3BMG3 65 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 CKS2P33552 79 aa13.65□□□□□ -0.22
LRCH3-201ENST00000334859 LOXL1Q08397 574 aaPredicted RBP13.65□□□□□ -0.22
LRCH3-201ENST00000334859 IGHV1-69DA0A0B4J2H0 117 aa13.64□□□□□ -0.23
LRCH3-201ENST00000334859 NCR2O95944 276 aa13.64□□□□□ -0.23
LRCH3-201ENST00000334859 IGHV1-69P01742 117 aa13.64□□□□□ -0.23
LRCH3-201ENST00000334859 PIMREGQ9BSJ6 248 aa13.64□□□□□ -0.23
LRCH3-201ENST00000334859 IGHV4-61A0A0C4DH41 118 aa13.64□□□□□ -0.23
LRCH3-201ENST00000334859 PAX8Q06710 450 aa13.64□□□□□ -0.23
LRCH3-201ENST00000334859 RBAKDNA6NC62 111 aa13.63□□□□□ -0.23
LRCH3-201ENST00000334859 LINC01545Q5VT33 79 aa13.63□□□□□ -0.23
LRCH3-201ENST00000334859 C8orf86Q6ZUL3 223 aa13.63□□□□□ -0.23
LRCH3-201ENST00000334859 OR8A1Q8NGG7 326 aa13.63□□□□□ -0.23
LRCH3-201ENST00000334859 MSRB1Q9NZV6 116 aa13.63□□□□□ -0.23
LRCH3-201ENST00000334859 TRGV3P03979 118 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 NPSP0C0P6 89 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 ZNF124Q15973 351 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 CCL19Q99731 98 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 GOLT1BQ9Y3E0 138 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 NPYP01303 97 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
LRCH3-201ENST00000334859 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 ZNF575Q86XF7 245 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 FLNCQ14315 2725 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 SPG11Q96JI7 2443 aa13.62□□□□□ -0.23
LRCH3-201ENST00000334859 A0A096LNJ9 63 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 FXYD7P58549 80 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 SRSF2Q01130 221 aaKnown RBP13.61□□□□□ -0.23
LRCH3-201ENST00000334859 GAGE1Q13065 139 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 SLC25A34Q6PIV7 304 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 AGPAT4-IT1Q9H0P7 198 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 FAM223BA6NKX1 122 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 LY6EQ16553 131 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 FAM223AQ8IWN6 122 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 PIFOQ8TCI5 191 aa13.61□□□□□ -0.23
LRCH3-201ENST00000334859 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
LRCH3-201ENST00000334859 IGHV4-38-2P0DP08 117 aa13.6□□□□□ -0.23
LRCH3-201ENST00000334859 ARL3P36405 182 aa13.6□□□□□ -0.23
LRCH3-201ENST00000334859 PRSS57Q6UWY2 283 aa13.59□□□□□ -0.23
LRCH3-201ENST00000334859 CNFNQ9BYD5 112 aa13.59□□□□□ -0.23
LRCH3-201ENST00000334859 SCRT2Q9NQ03 307 aa13.59□□□□□ -0.23
LRCH3-201ENST00000334859 HBDP02042 147 aa13.59□□□□□ -0.23
LRCH3-201ENST00000334859 C19orf54Q5BKX5 351 aa13.59□□□□□ -0.23
LRCH3-201ENST00000334859 C16orf92Q96LL3 132 aa13.59□□□□□ -0.23
LRCH3-201ENST00000334859 CELSR2Q9HCU4 2923 aa13.58□□□□□ -0.24
LRCH3-201ENST00000334859 CLEC2AQ6UVW9 174 aa13.58□□□□□ -0.24
LRCH3-201ENST00000334859 C10orf105Q8TEF2 133 aa13.58□□□□□ -0.24
LRCH3-201ENST00000334859 U3KQE9 123 aa13.58□□□□□ -0.24
LRCH3-201ENST00000334859 MRPL53Q96EL3 112 aaKnown RBP13.57□□□□□ -0.24
LRCH3-201ENST00000334859 MS4A6AQ9H2W1 248 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 C11orf21Q9P2W6 132 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 IGKV3D-20A0A0C4DH25 116 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 TRBV12-3P01733 135 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 ATP5J2P56134 94 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 HIST1H1AQ02539 215 aaPredicted RBP13.57□□□□□ -0.24
LRCH3-201ENST00000334859 MPV17L2Q567V2 206 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 Q6ZVH6 145 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 RNF185Q96GF1 192 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 PSMG3-AS1Q96PY0 264 aa13.57□□□□□ -0.24
LRCH3-201ENST00000334859 H3BUX3 64 aa13.56□□□□□ -0.24
LRCH3-201ENST00000334859 TCF21O43680 179 aa13.56□□□□□ -0.24
LRCH3-201ENST00000334859 MAP1LC3AQ9H492 121 aa13.56□□□□□ -0.24
LRCH3-201ENST00000334859 CRIP2P52943 208 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms