RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 PPBPP02775 128 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 RPLP1P05386 114 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 ZNF295-AS1Q8N0V1 137 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 WFDC12Q8WWY7 111 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 MRPL53Q96EL3 112 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 C1orf159Q96HA4 380 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 RBMY1BA6NDE4 496 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 RBMY1EA6NEQ0 496 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 RBMY1DP0C7P1 496 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 RBMY1A1P0DJD3 496 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 RBMY1CP0DJD4 496 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 FXYD7P58549 80 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 RPL23P62829 140 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 GCSAMLQ5JQS6 135 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 TOMM20LQ6UXN7 152 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 VAMP8Q9BV40 100 aa6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 ZNF256Q9Y2P7 627 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-201ENST00000317968 OR5A1Q8NGJ0 315 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 OR10AG1Q8NH19 301 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 RAB37Q96AX2 223 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 NUDT11Q96G61 164 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 SPATA25Q9BR10 227 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 LRRK2Q5S007 2527 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 RNASE1P07998 156 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 MDKP21741 143 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 VAMP3Q15836 100 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 PIFOQ8TCI5 191 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 TCRAP04437 139 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 CRIP2P52943 208 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 ZNF491Q8N8L2 437 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 IL36BQ9NZH7 164 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 DLX4Q92988 240 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 VCX2Q9H322 139 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 SCO2A0A1W2PP80 73 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 K7EMT4 169 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 FOLR2P14207 255 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 DMRTA1Q5VZB9 504 aa6.7□□□□□ -1.34
PDLIM5-201ENST00000317968 A8MWV9 139 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 CKS1BP61024 79 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 C1orf229Q6ZS94 237 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 ERASQ7Z444 233 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 TRBV24-1A0A075B6N3 115 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 TRAV34A0A0B4J273 112 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 C7orf71A4D174 169 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 J3QR89 54 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 IGKV1-17P01599 117 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 OR11H2Q8NH07 326 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 ABCA1O95477 2261 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 FAM231BA6NCW3 169 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 PYYP10082 97 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 CBLN2Q8IUK8 224 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 GRIFINA4D1Z8 144 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 SLC25A20O43772 301 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 PFN1P07737 140 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 ZNF726P1Q15940 193 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 MLANAQ16655 118 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 RASL11AQ6T310 242 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 TOMM7Q9P0U1 55 aa6.69□□□□□ -1.34
PDLIM5-201ENST00000317968 TRBV19A0A075B6N1 114 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 AZU1P20160 251 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 ORMDL2Q53FV1 153 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 CT83Q5H943 113 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 WIPF2Q8TF74 440 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 SCGB3A1Q96QR1 104 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 SCRT1Q9BWW7 348 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 SMPXQ9UHP9 88 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 NOTCH2Q04721 2471 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 CDKN1BP46527 198 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 JOSD1Q15040 202 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 TMEM160Q9NX00 188 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 ZNF492Q9P255 531 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 LENEPQ9Y5L5 61 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 TNCP24821 2201 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 HILS1P60008 231 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 LINC00469Q8N7U9 141 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 OR13C6PQ8NH95 151 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 CSTL1Q9H114 145 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 IGHV3-53P01767 116 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 ISOC2Q96AB3 205 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 ZFYVE26Q68DK2 2539 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 C5orf52A6NGY3 159 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 CRLF1O75462 422 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 SRSF2Q01130 221 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 ZNF493Q6ZR52 646 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 FAM231DQ6ZW35 169 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 LINC01551Q86U37 167 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 C16orf74Q96GX8 76 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 FANCD2OSQ96PS1 177 aa6.68□□□□□ -1.34
PDLIM5-201ENST00000317968 WI2-2373I1.2A0A1W2PRP0 233 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 ERCC8Q13216 396 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 PET117Q6UWS5 81 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 ORMDL3Q8N138 153 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 TMEM75Q8N9X5 138 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 NXT2Q9NPJ8 142 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 CYSLTR1Q9Y271 337 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 PAX4O43316 350 aa6.67□□□□□ -1.34
PDLIM5-201ENST00000317968 HOXA5P20719 270 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms