RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 PAX8Q06710 450 aa13.15□□□□□ -0.3
RTN1-201ENST00000267484 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
RTN1-201ENST00000267484 LGALS9BQ3B8N2 356 aa13.14□□□□□ -0.31
RTN1-201ENST00000267484 LGALS9CQ6DKI2 356 aa13.14□□□□□ -0.31
RTN1-201ENST00000267484 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
RTN1-201ENST00000267484 PDE6HQ13956 83 aa13.14□□□□□ -0.31
RTN1-201ENST00000267484 BOD1L2Q8IYS8 172 aa13.14□□□□□ -0.31
RTN1-201ENST00000267484 SMAD7O15105 426 aaKnown RBP13.14□□□□□ -0.31
RTN1-201ENST00000267484 NDUFA3O95167 84 aa13.14□□□□□ -0.31
RTN1-201ENST00000267484 KIR3DS1Q14943 382 aa13.14□□□□□ -0.31
RTN1-201ENST00000267484 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
RTN1-201ENST00000267484 A1L4Q6 167 aa13.13□□□□□ -0.31
RTN1-201ENST00000267484 CTSGP08311 255 aa13.13□□□□□ -0.31
RTN1-201ENST00000267484 CDSNQ15517 529 aa13.13□□□□□ -0.31
RTN1-201ENST00000267484 IGHV3-49A0A0A0MS15 119 aa13.13□□□□□ -0.31
RTN1-201ENST00000267484 NPBQ8NG41 125 aa13.13□□□□□ -0.31
RTN1-201ENST00000267484 RPL7P18124 248 aaKnown RBP13.12□□□□□ -0.31
RTN1-201ENST00000267484 SEC11AP67812 179 aa13.12□□□□□ -0.31
RTN1-201ENST00000267484 LY6G5BQ8NDX9 201 aa13.12□□□□□ -0.31
RTN1-201ENST00000267484 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
RTN1-201ENST00000267484 AP1S3Q96PC3 154 aa13.12□□□□□ -0.31
RTN1-201ENST00000267484 IGKV2D-26A0A0A0MRZ7 120 aa13.12□□□□□ -0.31
RTN1-201ENST00000267484 K7EMI3 77 aa13.12□□□□□ -0.31
RTN1-201ENST00000267484 IGF2RP11717 2491 aa13.12□□□□□ -0.31
RTN1-201ENST00000267484 OR11H6Q8NGC7 330 aa13.11□□□□□ -0.31
RTN1-201ENST00000267484 LEPP41159 167 aa13.11□□□□□ -0.31
RTN1-201ENST00000267484 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
RTN1-201ENST00000267484 Q6ZQT7 251 aa13.11□□□□□ -0.31
RTN1-201ENST00000267484 CELSR1Q9NYQ6 3014 aa13.11□□□□□ -0.31
RTN1-201ENST00000267484 IGLC6P0CF74 106 aa13.11□□□□□ -0.31
RTN1-201ENST00000267484 ADAMTSL5Q6ZMM2 481 aa13.11□□□□□ -0.31
RTN1-201ENST00000267484 PPBPP02775 128 aa13.1□□□□□ -0.31
RTN1-201ENST00000267484 COTL1Q14019 142 aa13.1□□□□□ -0.31
RTN1-201ENST00000267484 SPTAN1Q13813 2472 aaKnown RBP13.1□□□□□ -0.31
RTN1-201ENST00000267484 IL17RELQ6ZVW7 336 aa13.1□□□□□ -0.31
RTN1-201ENST00000267484 C9orf118A6NHY6 69 aa13.1□□□□□ -0.31
RTN1-201ENST00000267484 CEACAM3P40198 252 aa13.1□□□□□ -0.31
RTN1-201ENST00000267484 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
RTN1-201ENST00000267484 A0A0G2JLM5 398 aa13.09□□□□□ -0.31
RTN1-201ENST00000267484 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
RTN1-201ENST00000267484 RIPPLY3P57055 190 aa13.09□□□□□ -0.31
RTN1-201ENST00000267484 ECSCRQ19T08 205 aa13.09□□□□□ -0.31
RTN1-201ENST00000267484 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
RTN1-201ENST00000267484 A6NDN8 102 aa13.09□□□□□ -0.31
RTN1-201ENST00000267484 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
RTN1-201ENST00000267484 PRSS1P07477 247 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 VMO1Q7Z5L0 202 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 TRAV26-2A0A0B4J265 109 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 ODF3BA8MYP8 253 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 H3BRM9 83 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 TNFRSF6BO95407 300 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 TMEM11P17152 192 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 BMI1P35226 326 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 HSD52Q0P140 79 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 UFSP1Q6NVU6 142 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 MAP1LC3AQ9H492 121 aa13.08□□□□□ -0.32
RTN1-201ENST00000267484 TRGV3P03979 118 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 RPS20P60866 119 aaKnown RBP13.07□□□□□ -0.32
RTN1-201ENST00000267484 GCSHP23434 173 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 IGHV7-81A0A0B4J1V7 117 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 S100A7AQ86SG5 101 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 GTSCR1Q86UQ5 136 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 DPF1Q92782 380 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 VKORC1Q9BQB6 163 aa13.07□□□□□ -0.32
RTN1-201ENST00000267484 K7ERJ3 54 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 PRTN3P24158 256 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 TCF15Q12870 199 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 C15orf32Q32M92 178 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 FABP5P3A8MUU1 101 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 SPRY2O43597 315 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 CLEC3BP05452 202 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 TMEM158Q8WZ71 300 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 FOXC2Q99958 501 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 FXYD2P54710 66 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 OR9G4Q8NGQ1 327 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 PSMG3-AS1Q96PY0 264 aa13.06□□□□□ -0.32
RTN1-201ENST00000267484 ZFP36P26651 326 aaKnown RBP13.05□□□□□ -0.32
RTN1-201ENST00000267484 ODF1Q14990 250 aa13.05□□□□□ -0.32
RTN1-201ENST00000267484 DTX2Q86UW9 622 aa13.05□□□□□ -0.32
RTN1-201ENST00000267484 OR2K2Q8NGT1 345 aa13.05□□□□□ -0.32
RTN1-201ENST00000267484 LINC01548A6NM66 108 aa13.05□□□□□ -0.32
RTN1-201ENST00000267484 K7ERU9 68 aa13.05□□□□□ -0.32
RTN1-201ENST00000267484 IGKV3D-20A0A0C4DH25 116 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 FBLL1A6NHQ2 334 aaKnown RBP13.04□□□□□ -0.32
RTN1-201ENST00000267484 CCL21O00585 134 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 GTF2H5Q6ZYL4 71 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 COX8CQ7Z4L0 72 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 TIMD4Q96H15 378 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 HHLA3Q9XRX5 114 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 K7EP34 96 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
RTN1-201ENST00000267484 G3V318 75 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 J3KRW8 73 aa13.04□□□□□ -0.32
RTN1-201ENST00000267484 CLEC19AQ6UXS0 136 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 UFC1Q9Y3C8 167 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 SPCS1Q9Y6A9 102 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
RTN1-201ENST00000267484 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 FCER1GP30273 86 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms