RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NBPF19A0A087WUL8 3843 aa13.29□□□□□ -0.28
FOXA1-201ENST00000250448 CRIP1P50238 77 aa13.29□□□□□ -0.28
FOXA1-201ENST00000250448 KRTAP10-9P60411 292 aa13.29□□□□□ -0.28
FOXA1-201ENST00000250448 FOXE3Q13461 319 aa13.29□□□□□ -0.28
FOXA1-201ENST00000250448 ZFHX3Q15911 3703 aa13.29□□□□□ -0.28
FOXA1-201ENST00000250448 ZANQ9Y493 2812 aa13.28□□□□□ -0.28
FOXA1-201ENST00000250448 VMO1Q7Z5L0 202 aa13.28□□□□□ -0.28
FOXA1-201ENST00000250448 LYPD1Q8N2G4 141 aa13.28□□□□□ -0.28
FOXA1-201ENST00000250448 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
FOXA1-201ENST00000250448 ABCA1O95477 2261 aa13.28□□□□□ -0.28
FOXA1-201ENST00000250448 NAV2Q8IVL1 2488 aa13.28□□□□□ -0.28
FOXA1-201ENST00000250448 TRAV8-6A0A0B4J262 113 aa13.28□□□□□ -0.28
FOXA1-201ENST00000250448 IGHV4-61A0A0C4DH41 118 aa13.28□□□□□ -0.28
FOXA1-201ENST00000250448 TRAV26-1A0A087WT03 109 aa13.27□□□□□ -0.28
FOXA1-201ENST00000250448 K7EIM0 57 aa13.27□□□□□ -0.28
FOXA1-201ENST00000250448 SNAI2O43623 268 aa13.27□□□□□ -0.28
FOXA1-201ENST00000250448 IFI27P40305 119 aaPredicted RBP13.27□□□□□ -0.28
FOXA1-201ENST00000250448 PLGLAQ15195 96 aa13.27□□□□□ -0.28
FOXA1-201ENST00000250448 HIST2H2BCQ6DN03 193 aa13.27□□□□□ -0.28
FOXA1-201ENST00000250448 ZNF493Q6ZR52 646 aa13.27□□□□□ -0.28
FOXA1-201ENST00000250448 RPEQ96AT9 228 aa13.27□□□□□ -0.28
FOXA1-201ENST00000250448 IGHV4-30-2A0A087WSY4 118 aa13.27□□□□□ -0.29
FOXA1-201ENST00000250448 A0A096LNJ9 63 aa13.27□□□□□ -0.29
FOXA1-201ENST00000250448 FAM106CPP0CH98 169 aa13.27□□□□□ -0.29
FOXA1-201ENST00000250448 CEACAM3P40198 252 aa13.27□□□□□ -0.29
FOXA1-201ENST00000250448 FAM106AQ4KMX7 169 aa13.27□□□□□ -0.29
FOXA1-201ENST00000250448 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.29
FOXA1-201ENST00000250448 LOXL1Q08397 574 aaPredicted RBP13.26□□□□□ -0.29
FOXA1-201ENST00000250448 C8orf49Q96NF6 230 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 CT45A10P0DMU9 189 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 FGF6P10767 208 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 SEC11AP67812 179 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 TMEM97Q5BJF2 176 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 DPF1Q92782 380 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 RNF125Q96EQ8 232 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 APCP25054 2843 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 C7orf71A4D174 169 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 D6R8Y8 96 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 M0R3E3 92 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 MRPS12O15235 138 aaKnown RBP13.26□□□□□ -0.29
FOXA1-201ENST00000250448 GNG7O60262 68 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 ZNF491Q8N8L2 437 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 ZNF414Q96IQ9 312 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 SRSF8Q9BRL6 282 aaKnown RBP13.26□□□□□ -0.29
FOXA1-201ENST00000250448 SIGLEC8Q9NYZ4 499 aa13.26□□□□□ -0.29
FOXA1-201ENST00000250448 IL4P05112 153 aa13.25□□□□□ -0.29
FOXA1-201ENST00000250448 PRTN3P24158 256 aa13.25□□□□□ -0.29
FOXA1-201ENST00000250448 MEGF9Q9H1U4 602 aa13.25□□□□□ -0.29
FOXA1-201ENST00000250448 LOC389332A0A1B0GUA5 103 aa13.25□□□□□ -0.29
FOXA1-201ENST00000250448 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
FOXA1-201ENST00000250448 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
FOXA1-201ENST00000250448 U3KQK5 164 aa13.25□□□□□ -0.29
FOXA1-201ENST00000250448 M0R1W7 72 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 CNIH1O95406 144 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 LYZL1Q6UWQ5 148 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 PRELID3AQ96N28 172 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 PIMREGQ9BSJ6 248 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 HIF1ANQ9NWT6 349 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 TMEM213A2RRL7 107 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 TIMM23O14925 209 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 DYNAPQ8N1N2 210 aa13.24□□□□□ -0.29
FOXA1-201ENST00000250448 TMSB15BA0A087X1C1 80 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 LY6LH3BQJ8 138 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 CLEC3BP05452 202 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 LGALS9BQ3B8N2 356 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 FAM104BQ5XKR9 115 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 LGALS9CQ6DKI2 356 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 OR1N2Q8NGR9 330 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 A0A1B0GV72 72 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 FCGR2BP31994 310 aaPredicted RBP13.23□□□□□ -0.29
FOXA1-201ENST00000250448 AMN1Q8IY45 258 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 OR11H6Q8NGC7 330 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 RNF5Q99942 180 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 SIRPDQ9H106 197 aa13.23□□□□□ -0.29
FOXA1-201ENST00000250448 IGHV3OR16-10A0A075B7F0 116 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 BRI3O95415 125 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 WI2-2373I1.2A0A1W2PRP0 233 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 GAGE12BA1L429 117 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 SH2D1AO60880 128 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 SAMD13Q5VXD3 122 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 AAMDCQ9H7C9 122 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 RABAC1Q9UI14 185 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 CACNG7P62955 275 aa13.22□□□□□ -0.29
FOXA1-201ENST00000250448 PDE6HQ13956 83 aa13.21□□□□□ -0.29
FOXA1-201ENST00000250448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.21□□□□□ -0.296e-9■■□□□ 12.1
FOXA1-201ENST00000250448 GCN1Q92616 2671 aaKnown RBP13.21□□□□□ -0.3
FOXA1-201ENST00000250448 ODF3BA8MYP8 253 aa13.21□□□□□ -0.3
FOXA1-201ENST00000250448 MRPL51Q4U2R6 128 aaKnown RBP13.21□□□□□ -0.3
FOXA1-201ENST00000250448 BOD1L2Q8IYS8 172 aa13.21□□□□□ -0.3
FOXA1-201ENST00000250448 MAPK1IP1LQ8NDC0 245 aa13.21□□□□□ -0.3
FOXA1-201ENST00000250448 SMPXQ9UHP9 88 aa13.21□□□□□ -0.3
FOXA1-201ENST00000250448 HBDP02042 147 aa13.2□□□□□ -0.3
FOXA1-201ENST00000250448 PLA2G2AP14555 144 aa13.2□□□□□ -0.3
FOXA1-201ENST00000250448 S4R3C0 116 aa13.2□□□□□ -0.3
FOXA1-201ENST00000250448 CSPG4Q6UVK1 2322 aa13.2□□□□□ -0.3
FOXA1-201ENST00000250448 A6NDN8 102 aa13.2□□□□□ -0.3
FOXA1-201ENST00000250448 BCL6BQ8N143 479 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms