RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CIARTQ8N365 385 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-201ENST00000220429 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 RITA1Q96K30 269 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 LINC01587Q99440 93 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 SRRM4A7MD48 611 aaKnown RBP10.77□□□□□ -0.69
GABPB1-201ENST00000220429 SHISA9B4DS77 424 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 HOXA3O43365 443 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-201ENST00000220429 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
GABPB1-201ENST00000220429 VKORC1L1Q8N0U8 176 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 SGK494Q96LW2 274 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 CCL13Q99616 98 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 SIGLEC9Q9Y336 463 aa10.77□□□□□ -0.69
GABPB1-201ENST00000220429 TMSB15BA0A087X1C1 80 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 A8MWV9 139 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 FOXC1Q12948 553 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 Q6ZQT7 251 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 FAM216BQ8N7L0 139 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 POU2AF1Q16633 256 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 GFRALQ6UXV0 394 aa10.76□□□□□ -0.69
GABPB1-201ENST00000220429 GNG5P63218 68 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 CCL8P80075 99 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 ANKRD29Q8N6D5 301 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 S1PR3Q99500 378 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 MLST8Q9BVC4 326 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 TNCP24821 2201 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 A0A1W2PPI3 338 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 SAA2P0DJI9 122 aaPredicted RBP10.75□□□□□ -0.69
GABPB1-201ENST00000220429 HLA-DRB4P13762 266 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 KIR2DS2P43631 304 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
GABPB1-201ENST00000220429 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 ZCCHC24Q8N2G6 241 aaKnown RBP10.75□□□□□ -0.69
GABPB1-201ENST00000220429 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 SLC25A2Q9BXI2 301 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 ZMAT4Q9H898 229 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 ZNF492Q9P255 531 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 HLA-DRB4X5D2U9 266 aa10.75□□□□□ -0.69
GABPB1-201ENST00000220429 BSPH1Q075Z2 132 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 TMEM213A2RRL7 107 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 TEX36Q5VZQ5 186 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 ZFP2Q6ZN57 461 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 SBSPONQ8IVN8 264 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 ENY2Q9NPA8 101 aa10.74□□□□□ -0.69
GABPB1-201ENST00000220429 A0A1B0GUT8 65 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 MAPKAPK5-AS1Q8N8E1 139 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 TRBV7-3A0A075B6L6 115 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 C17orf100A8MU93 164 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 IGKCP01834 107 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 ERVK-16P61578 105 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 MORN5Q5VZ52 161 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 SCNM1Q9BWG6 230 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 C21orf62Q9NYP8 219 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 ARFGEF3Q5TH69 2177 aa10.73□□□□□ -0.69
GABPB1-201ENST00000220429 H3BVH4 76 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 PYYP10082 97 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 RIGQ13278 110 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 LY6DQ14210 128 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 LINC00574Q9H8X3 128 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 TNFRSF1AP19438 455 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 PAX8Q06710 450 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 ZC2HC1BQ5TFG8 222 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 SFTA2Q6UW10 78 aa10.72□□□□□ -0.69
GABPB1-201ENST00000220429 SLC25A48Q6ZT89 311 aaKnown RBP10.72□□□□□ -0.69
GABPB1-201ENST00000220429 TRGV8A0A0C4DH27 118 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 MFAP4P55083 255 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 LRRC75A-AS1Q8N1F1 130 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 OR1L4Q8NGR5 311 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 ONECUT1Q9UBC0 465 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 EPDR1Q9UM22 224 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 RELNP78509 3460 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 IGKV1OR2-108A0A075B7D4 117 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 MYMXA0A1B0GTQ4 84 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 C9JAW5 83 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 K7ENP7 123 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 ARMS2P0C7Q2 107 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 LYRM7Q5U5X0 104 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 PAXXQ9BUH6 204 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 HIGD1AQ9Y241 93 aa10.71□□□□□ -0.69
GABPB1-201ENST00000220429 D6R8Y8 96 aa10.71□□□□□ -0.7
GABPB1-201ENST00000220429 J3KT08 172 aa10.71□□□□□ -0.7
GABPB1-201ENST00000220429 ZNRD1Q9P1U0 126 aa10.71□□□□□ -0.7
GABPB1-201ENST00000220429 LINC01549A6NIU2 74 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 OVOL3O00110 214 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 UBE2D3P61077 147 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 UBE2D2P62837 147 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 MRPL23Q16540 153 aaKnown RBP10.7□□□□□ -0.7
GABPB1-201ENST00000220429 RPUSD1Q9UJJ7 312 aaKnown RBP10.7□□□□□ -0.7
GABPB1-201ENST00000220429 C15orf61A6NNL5 157 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 DLL1O00548 723 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 SCGB1C2P0DMR2 95 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 CHCHD5Q9BSY4 110 aa10.7□□□□□ -0.7
GABPB1-201ENST00000220429 SPTA1P02549 2419 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms