RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RNF125Q96EQ8 232 aa8.29□□□□□ -1.08
CX3CL1-201ENST00000006053 RABAC1Q9UI14 185 aa8.29□□□□□ -1.08
CX3CL1-201ENST00000006053 A4D1N5 150 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 TMEM189A5PLL7 270 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 ADAMTSL5Q6ZMM2 481 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 A0A096LNJ9 63 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 A6NDN8 102 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 H3BRN7 92 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 K7EIM0 57 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 IGLV1-47P01700 117 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 ZNF491Q8N8L2 437 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 RNF183Q96D59 192 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 PRRG2O14669 202 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 FABP2P12104 132 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 NMUP48645 174 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 OR5A1Q8NGJ0 315 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 ZNF414Q96IQ9 312 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 AAMDCQ9H7C9 122 aa8.28□□□□□ -1.08
CX3CL1-201ENST00000006053 TACC2O95359 2948 aa8.27□□□□□ -1.08
CX3CL1-201ENST00000006053 B5MCH6 92 aa8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 SEC11AP67812 179 aa8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 IGFL3Q6UXB1 125 aa8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 ORMDL3Q8N138 153 aa8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 KAAG1Q9UBP8 84 aa8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 IGKV2-40A0A087WW87 121 aaPredicted RBP8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 IGKV2D-40P01614 121 aaPredicted RBP8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
CX3CL1-201ENST00000006053 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 E7EQL1 145 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 H3BRM9 83 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 SH2D1AO60880 128 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 ARL3P36405 182 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 MRPL51Q4U2R6 128 aaKnown RBP8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 FAM104BQ5XKR9 115 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 Q6AWC8 147 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 ABHD17AQ96GS6 310 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 ANKHD1Q8IWZ3 2542 aaKnown RBP8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 TIMM23O14925 209 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 FGF6P10767 208 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 CKS2P33552 79 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 TWIST1Q15672 202 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 TM4SF20Q53R12 229 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 IGFL4Q6B9Z1 124 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 C18orf15Q96N68 181 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 MRPL16Q9NX20 251 aaKnown RBP8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 ONECUT1Q9UBC0 465 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 A1L4Q6 167 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 IGHV3-23P01764 117 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 Q8TAT8 98 aa8.26□□□□□ -1.09
CX3CL1-201ENST00000006053 TSPAN13O95857 204 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 HBDP02042 147 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 HES1Q14469 280 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 IGHV3OR16-8A0A075B7F1 116 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 A0A1W2PPM0 123 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 NPYP01303 97 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 LGALS9BQ3B8N2 356 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 LGALS9CQ6DKI2 356 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 ZNF493Q6ZR52 646 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 SH2D6Q7Z4S9 175 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 PCP2Q8IVA1 136 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 GATD1Q8NB37 220 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 IFI27L1Q96BM0 104 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 ARHGAP32A7KAX9 2087 aa8.25□□□□□ -1.09
CX3CL1-201ENST00000006053 NPIPB5A8MRT5 1133 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 SMAD7O15105 426 aaKnown RBP8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 MRPS12O15235 138 aaKnown RBP8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 DKK2Q9UBU2 259 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 LRBAP50851 2863 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 OR11H12B2RN74 326 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 SHISA9B4DS77 424 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 ETDBQ3ZM63 59 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 GFRALQ6UXV0 394 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 OR11H1Q8NG94 326 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 OR11H2Q8NH07 326 aa8.24□□□□□ -1.09
CX3CL1-201ENST00000006053 IGHV3-35A0A0C4DH35 117 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 SPINK8P0C7L1 97 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 EGR2P11161 476 aaPredicted RBP8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 WFDC2Q14508 124 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 FAM208BQ5VWN6 2430 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 SAMD5Q5TGI4 173 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 SPAG8Q99932 426 aaPredicted RBP8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 ORM1P02763 201 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 PRR30Q53SZ7 412 aaPredicted RBP8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 ANAPC13Q9BS18 74 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 MSRB1Q9NZV6 116 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 RAXQ9Y2V3 346 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 UFC1Q9Y3C8 167 aa8.23□□□□□ -1.09
CX3CL1-201ENST00000006053 CSMD1Q96PZ7 3565 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 NBR2O15453 112 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 NDUFS7O75251 213 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 ANXA2RQ3ZCQ2 193 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 VGLL1Q99990 258 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 U3KQK5 164 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 ZNF80P51504 273 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms