RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 P01799 113 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 P01803 113 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Prkar2aP12367 401 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Reg2Q08731 173 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cd200r4Q6XJV4 270 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr58Q7TRF6 309 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Parp11Q8CFF0 331 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Rnf115Q9D0C1 305 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Srp19Q9D7A6 144 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ighv5-12-4A0A0A6YWG4 117 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 eef1akmt3D3YWP0 232 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Gm2174F6ZVF2 133 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 IappP12968 93 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cd27P41272 250 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Scgb2b24Q7M747 112 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Eif5a2Q8BGY2 153 aaKnown RBP12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr1002Q8VFK2 318 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Q9CQT9 129 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Slc50a1Q9CXK4 221 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 A0A286YDM5 308 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Trav12d-1A0N8R0 115 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Gm15130F6PYN5 206 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 P04942 107 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr639Q8VGY8 316 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Tmem167aQ9CR64 72 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Zcchc10Q9CX48 178 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ccl28Q9JIL2 130 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Trbv5A0A0B4J1G9 113 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Tmem8bB1AWJ5 472 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Gm5093E9PZB3 174 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Lgals9O08573 353 aaKnown RBP12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 GbaP17439 515 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 G6pcP35576 357 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Prrc2cQ3TLH4 2846 aaKnown RBP12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 MidnQ3TPJ7 465 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Taar4Q5QD15 347 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr830Q8VFJ5 315 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Actl6bQ99MR0 426 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Vstm5Q9D806 199 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Prss1Q9Z1R9 246 aa12.05□□□□□ -0.48
Nup88-202ENSMUST00000108530 Zfyve26Q5DU37 2529 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr231E9Q0M4 307 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Iglc2P01844 104 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Zfp386Q1WWJ5 626 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr328Q5NCD3 310 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Vma21Q78T54 101 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Vmn1r26Q8R2D7 339 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ppp1r14aQ91VC7 147 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Sft2d3Q9CSV6 209 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Smco4Q9JIS3 59 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 NagkQ9QZ08 343 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cyb561d1A2AE42 229 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Gm17333C6EQI3 125 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ppt1O88531 306 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Rab5bP61021 215 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Isoc2aP85094 206 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Trav8d-1Q5R1H8 112 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 SlaQ60898 281 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Fbxw26Q8BI58 466 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 C1qtnf5Q8K479 243 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr1202Q8VF98 309 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr1183Q8VFF8 303 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Rwdd3Q8VIL2 267 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Plrg1Q922V4 513 aaKnown RBP12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ndufa2Q9CQ75 99 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Mrpl18Q9CQL5 180 aa12.04□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ighv7-2A0A0A6YX91 119 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 D930048N14RikA2AA67 225 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cldn34c3J3QJW5 233 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cldn34c2J3QNM1 233 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Casp6O08738 276 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Tcstv1O70619 171 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr141Q60880 325 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Igfbpl1Q80W15 270 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ankrd33Q8BXP5 385 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cldn34c1Q8K193 234 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr266Q8VFC3 316 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Med13lQ6JPI3 2207 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Degs1O09005 323 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ifitm5O88728 134 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Slc35e3Q6PGC7 313 aa12.03□□□□□ -0.48
Nup88-202ENSMUST00000108530 Inafm1E9PV59 130 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 Spint5J3KMK8 105 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 P04943 107 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 Vdac1Q60932 296 aaKnown RBP12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 AdoQ6PDY2 256 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 Lrrc20Q8CI70 184 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr482Q8VG03 323 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 Tmprss11dQ8VHK8 417 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 LystP97412 3788 aa12.02□□□□□ -0.49
Nup88-202ENSMUST00000108530 Ighv1-7A0A075B5T7 117 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Gm28778A0A087WSK7 233 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Gm5890A0A140LI04 305 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Cdc34bA0A140T8I4 237 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Gm17669F6QL70 154 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Onecut1O08755 465 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 BokO35425 213 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Rab33bO35963 229 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Hist1h1aP43275 213 aa12.01□□□□□ -0.49
Nup88-202ENSMUST00000108530 Pax6P63015 422 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms