Protein–RNA interactions for Protein: Q8VIL2

Rwdd3, RWD domain-containing protein 3, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rwdd3Q8VIL2 Gm25239-201ENSMUST00000174915 86 ntBASIC30.71■■■□□ 2.51
Rwdd3Q8VIL2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rwdd3Q8VIL2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rwdd3Q8VIL2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rwdd3Q8VIL2 Gm15042-201ENSMUST00000120212 883 ntBASIC27.11■■□□□ 1.93
Rwdd3Q8VIL2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rwdd3Q8VIL2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Rwdd3Q8VIL2 Gm24109-201ENSMUST00000175489 103 ntBASIC26.47■■□□□ 1.83
Rwdd3Q8VIL2 Gm15045-201ENSMUST00000117359 883 ntBASIC26.43■■□□□ 1.82
Rwdd3Q8VIL2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rwdd3Q8VIL2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rwdd3Q8VIL2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Rwdd3Q8VIL2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rwdd3Q8VIL2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rwdd3Q8VIL2 Gm23366-201ENSMUST00000175022 89 ntBASIC25.76■■□□□ 1.71
Rwdd3Q8VIL2 Psd-208ENSMUST00000224556 2034 ntBASIC25.67■■□□□ 1.7
Rwdd3Q8VIL2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rwdd3Q8VIL2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rwdd3Q8VIL2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.46■■□□□ 1.67
Rwdd3Q8VIL2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rwdd3Q8VIL2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rwdd3Q8VIL2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rwdd3Q8VIL2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rwdd3Q8VIL2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rwdd3Q8VIL2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Rwdd3Q8VIL2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Rwdd3Q8VIL2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rwdd3Q8VIL2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rwdd3Q8VIL2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rwdd3Q8VIL2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rwdd3Q8VIL2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.88■■□□□ 1.57
Rwdd3Q8VIL2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.83■■□□□ 1.57
Rwdd3Q8VIL2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rwdd3Q8VIL2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rwdd3Q8VIL2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.54■■□□□ 1.52
Rwdd3Q8VIL2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.47■■□□□ 1.51
Rwdd3Q8VIL2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Rwdd3Q8VIL2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rwdd3Q8VIL2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rwdd3Q8VIL2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rwdd3Q8VIL2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.22■■□□□ 1.47
Rwdd3Q8VIL2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rwdd3Q8VIL2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rwdd3Q8VIL2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Rwdd3Q8VIL2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rwdd3Q8VIL2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.14■■□□□ 1.45
Rwdd3Q8VIL2 Gm25238-201ENSMUST00000174914 89 ntBASIC24.11■■□□□ 1.45
Rwdd3Q8VIL2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rwdd3Q8VIL2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
Rwdd3Q8VIL2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rwdd3Q8VIL2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rwdd3Q8VIL2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rwdd3Q8VIL2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rwdd3Q8VIL2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rwdd3Q8VIL2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rwdd3Q8VIL2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rwdd3Q8VIL2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.79■■□□□ 1.4
Rwdd3Q8VIL2 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.77■■□□□ 1.4
Rwdd3Q8VIL2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rwdd3Q8VIL2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.77■■□□□ 1.4
Rwdd3Q8VIL2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Rwdd3Q8VIL2 Gm27325-201ENSMUST00000175467 74 ntBASIC23.75■■□□□ 1.39
Rwdd3Q8VIL2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rwdd3Q8VIL2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rwdd3Q8VIL2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rwdd3Q8VIL2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rwdd3Q8VIL2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rwdd3Q8VIL2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Rwdd3Q8VIL2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.6■■□□□ 1.37
Rwdd3Q8VIL2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rwdd3Q8VIL2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rwdd3Q8VIL2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rwdd3Q8VIL2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.51■■□□□ 1.35
Rwdd3Q8VIL2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.5■■□□□ 1.35
Rwdd3Q8VIL2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rwdd3Q8VIL2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rwdd3Q8VIL2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rwdd3Q8VIL2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rwdd3Q8VIL2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
Rwdd3Q8VIL2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Rwdd3Q8VIL2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rwdd3Q8VIL2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Rwdd3Q8VIL2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rwdd3Q8VIL2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.32■■□□□ 1.32
Rwdd3Q8VIL2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rwdd3Q8VIL2 Rab21-202ENSMUST00000218831 843 ntBASIC23.23■■□□□ 1.31
Rwdd3Q8VIL2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rwdd3Q8VIL2 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.18■■□□□ 1.3
Rwdd3Q8VIL2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rwdd3Q8VIL2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rwdd3Q8VIL2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rwdd3Q8VIL2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.14■■□□□ 1.29
Rwdd3Q8VIL2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.14■■□□□ 1.29
Rwdd3Q8VIL2 Gm25262-201ENSMUST00000174934 133 ntBASIC23.12■■□□□ 1.29
Rwdd3Q8VIL2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rwdd3Q8VIL2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rwdd3Q8VIL2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rwdd3Q8VIL2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rwdd3Q8VIL2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rwdd3Q8VIL2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms