RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 LINC00208Q96KT6 92 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 ENY2Q9NPA8 101 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.43□□□□□ -2.48
SRP54-214ENST00000630962 DSTQ03001 7570 aaKnown RBP-0.44□□□□□ -2.48
SRP54-214ENST00000630962 A0A0J9YY99 117 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 CRHP06850 196 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 CXCL1P09341 107 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 NFYBP25208 207 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 TMBIM6P55061 237 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 DIAPH2-AS1Q14236 149 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 ZCCHC23Q6ZST2 131 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 GOLT1AQ6ZVE7 132 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 CST11Q9H112 138 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 CACYBPQ9HB71 228 aaKnown RBP-0.44□□□□□ -2.48
SRP54-214ENST00000630962 STAB1Q9NY15 2570 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 MUC2Q02817 5179 aa-0.44□□□□□ -2.48
SRP54-214ENST00000630962 FAM208BQ5VWN6 2430 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 RER1O15258 196 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 LYRM1O43325 122 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 IFNA4P05014 189 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 IDO1P14902 403 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 ARPP19P56211 112 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 SNRPD3P62318 126 aaKnown RBP-0.45□□□□□ -2.48
SRP54-214ENST00000630962 TAF1AQ15573 450 aaPredicted RBP-0.45□□□□□ -2.48
SRP54-214ENST00000630962 AP1S3Q96PC3 154 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 PARD6GQ9BYG4 376 aaPredicted RBP-0.45□□□□□ -2.48
SRP54-214ENST00000630962 MAP1LC3BQ9GZQ8 125 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 NMNAT1Q9HAN9 279 aaPredicted RBP-0.45□□□□□ -2.48
SRP54-214ENST00000630962 DOCK4Q8N1I0 1966 aa-0.45□□□□□ -2.48
SRP54-214ENST00000630962 CCDC144AA2RUR9 1427 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 FLNAP21333 2647 aaKnown RBP-0.46□□□□□ -2.48
SRP54-214ENST00000630962 NCAPD3P42695 1498 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 LRP2P98164 4655 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 COX6A2Q02221 97 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 FXYD3Q14802 87 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.46□□□□□ -2.48
SRP54-214ENST00000630962 PPTC7Q8NI37 304 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 GRPEL2Q8TAA5 225 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 SIGMAR1Q99720 223 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 FAM32AQ9Y421 112 aaKnown RBP-0.46□□□□□ -2.48
SRP54-214ENST00000630962 ZANQ9Y493 2812 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 DSPPQ9NZW4 1301 aa-0.46□□□□□ -2.48
SRP54-214ENST00000630962 HSPG2P98160 4391 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 LOC101927531A0A1B0GV80 90 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 IGHV3-30P01768 117 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 TCRBP04435 133 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 IGHV3-30-5P0DP03 117 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 SPA17Q15506 151 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 MSMO1Q15800 293 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 HACD4Q5VWC8 232 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 CTTNBP2Q8WZ74 1663 aa-0.47□□□□□ -2.48
SRP54-214ENST00000630962 NCOR1O75376 2440 aa-0.47□□□□□ -2.49
SRP54-214ENST00000630962 N4BP2Q86UW6 1770 aaPredicted RBP-0.47□□□□□ -2.49
SRP54-214ENST00000630962 UBR2Q8IWV8 1755 aa-0.47□□□□□ -2.49
SRP54-214ENST00000630962 NUP210LQ5VU65 1888 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 MUC12Q9UKN1 5478 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 HIST1H2BKO60814 126 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 HIST1H2BJP06899 126 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 PHBP35232 272 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 ETV6P41212 452 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 INSL3P51460 131 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 LIN52Q52LA3 116 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 PTRHD1Q6GMV3 140 aaKnown RBP-0.48□□□□□ -2.49
SRP54-214ENST00000630962 CSAG1Q6PB30 78 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 FAM216BQ8N7L0 139 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 C5orf56Q8N8D9 126 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 OR10X1Q8NGY0 326 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 TPRKBQ9Y3C4 175 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 ADGRL3Q9HAR2 1447 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 DCHS2Q6V1P9 2916 aa-0.48□□□□□ -2.49
SRP54-214ENST00000630962 NBDYA0A0U1RRE5 68 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 C3orf85A0A1B0GTC6 90 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 PIAS1O75925 651 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 ATP5HO75947 161 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 MT-ND6P03923 174 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 GYPBP06028 91 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 NCALDP61601 193 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 LSM6P62312 80 aaKnown RBP-0.49□□□□□ -2.49
SRP54-214ENST00000630962 IDO2Q6ZQW0 420 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 C3orf62Q6ZUJ4 267 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 LINC00269Q8N2A0 174 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 OR4C12Q96R67 309 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 PRR15LQ9BU68 103 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 EFCAB11Q9BUY7 163 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 OR2J1Q9GZK6 312 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 BIN3Q9NQY0 253 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 ASB4Q9Y574 426 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 ZFYVE9O95405 1425 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 MYO7AQ13402 2215 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 TRPM1Q7Z4N2 1603 aa-0.49□□□□□ -2.49
SRP54-214ENST00000630962 TANC1Q9C0D5 1861 aa-0.5□□□□□ -2.49
SRP54-214ENST00000630962 ATG2AQ2TAZ0 1938 aa-0.5□□□□□ -2.49
SRP54-214ENST00000630962 PTPN13Q12923 2485 aa-0.5□□□□□ -2.49
SRP54-214ENST00000630962 BBIP1A8MTZ0 92 aa-0.5□□□□□ -2.49
SRP54-214ENST00000630962 CFDP00746 253 aaPredicted RBP-0.5□□□□□ -2.49
SRP54-214ENST00000630962 IFNA14P01570 189 aa-0.5□□□□□ -2.49
SRP54-214ENST00000630962 TRGC2P03986 189 aa-0.5□□□□□ -2.49
SRP54-214ENST00000630962 ITGB3BPQ13352 177 aaPredicted RBP-0.5□□□□□ -2.49
SRP54-214ENST00000630962 OR8J2Q8NGG1 315 aa-0.5□□□□□ -2.49
SRP54-214ENST00000630962 PPP1R14BQ96C90 147 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms