RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 A0A1B0GW15 77 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 A0A1W2PS18 150 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 HIGD1CA8MV81 97 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 CHEK1O14757 476 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 SPINK4O60575 86 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 IGHV4-59P01825 116 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 APCSP02743 223 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 APOHP02749 345 aaPredicted RBP4.27□□□□□ -1.73
NEK3-211ENST00000629912 PF4V1P10720 104 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 FABP4P15090 132 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 ARL3P36405 182 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 JOSD1Q15040 202 aaPredicted RBP4.27□□□□□ -1.73
NEK3-211ENST00000629912 PYY3Q5JQD4 70 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 GDF5OSQ5U4N7 250 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 MRPL54Q6P161 138 aaKnown RBP4.27□□□□□ -1.73
NEK3-211ENST00000629912 GPHB5Q86YW7 130 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 KRTAP1-3Q8IUG1 177 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 TEX29Q8N6K0 151 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 GATD1Q8NB37 220 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 OR4X2Q8NGF9 303 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 OR2D3Q8NGH3 330 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 GTSF1Q8WW33 167 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 GLMPQ8WWB7 406 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 NOL4LQ96MY1 436 aaPredicted RBP4.27□□□□□ -1.73
NEK3-211ENST00000629912 PSMG3-AS1Q96PY0 264 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 PRR25Q96S07 402 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 KLK15Q9H2R5 256 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 LRRK2Q5S007 2527 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 VPS13CQ709C8 3753 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 EPG5Q9HCE0 2579 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 TRAV8-2A0A0B4J237 113 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 J3QKU1 62 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 NUPR1O60356 82 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 ELANEP08246 267 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 CT45A10P0DMU9 189 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 PLA2G2AP14555 144 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 PSMB8P28062 276 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 BMI1P35226 326 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 RPS20P60866 119 aaKnown RBP4.26□□□□□ -1.73
NEK3-211ENST00000629912 RAB4BP61018 213 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 SLC35B1P78383 322 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 FOXE3Q13461 319 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 KLF5Q13887 457 aaPredicted RBP4.26□□□□□ -1.73
NEK3-211ENST00000629912 PDZD11Q5EBL8 140 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 FAM162BQ5T6X4 162 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 DMRTA1Q5VZB9 504 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 Q6AWC8 147 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 C9orf47Q6ZRZ4 202 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 TCF24Q7RTU0 167 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 TMEM256Q8N2U0 113 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 RNF152Q8N8N0 203 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 PGLYRP4Q96LB8 373 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 Q96MF0 132 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 VGLL1Q99990 258 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 NDFIP1Q9BT67 221 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 NPFFR1Q9GZQ6 430 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 NIT2Q9NQR4 276 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 PEF1Q9UBV8 284 aaKnown RBP4.26□□□□□ -1.73
NEK3-211ENST00000629912 VPREB3Q9UKI3 123 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 CELSR2Q9HCU4 2923 aa4.26□□□□□ -1.73
NEK3-211ENST00000629912 USP9YO00507 2555 aaPredicted RBP4.26□□□□□ -1.73
NEK3-211ENST00000629912 FBN2P35556 2912 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 IGHV3OR16-8A0A075B7F1 116 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
NEK3-211ENST00000629912 IGHV7-4-1A0A0J9YVY3 117 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 A0A1B0GUT8 65 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 TMEM189A5PLL7 270 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 FABP5P3A8MUU1 101 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
NEK3-211ENST00000629912 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 SMAD7O15105 426 aaKnown RBP4.25□□□□□ -1.73
NEK3-211ENST00000629912 ZNF207O43670 478 aaKnown RBP4.25□□□□□ -1.73
NEK3-211ENST00000629912 SH2D1AO60880 128 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
NEK3-211ENST00000629912 TRBV12-3P01733 135 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 HLA-DMBP28068 263 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 LINC00310P59036 64 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 HBBP68871 147 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 PTPN13Q12923 2485 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 SLAQ13239 276 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 RIGQ13278 110 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 KIAA1644Q3SXP7 199 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 FAM106AQ4KMX7 169 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 IGFL4Q6B9Z1 124 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 UNQ9165/PRO28630Q6UXU0 137 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 C8orf86Q6ZUL3 223 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 BAGE3Q86Y29 109 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 Q8N2B8 174 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 TMEM86BQ8N661 226 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 MAPK1IP1LQ8NDC0 245 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 MYOZ3Q8TDC0 251 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 C8orf49Q96NF6 230 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 ASCL2Q99929 193 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 ALKBH7Q9BT30 221 aaPredicted RBP4.25□□□□□ -1.73
NEK3-211ENST00000629912 AGPAT4-IT1Q9H0P7 198 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 GSN-AS1Q9NRJ2 163 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 SMPXQ9UHP9 88 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 LENEPQ9Y5L5 61 aa4.25□□□□□ -1.73
NEK3-211ENST00000629912 MAP1AP78559 2803 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms