RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 SMUG1Q53HV7 270 aa22.88■■□□□ 1.25
H3F3B-203ENST00000586518 LCNL1Q6ZST4 164 aa22.88■■□□□ 1.25
H3F3B-203ENST00000586518 MRPL53Q96EL3 112 aaKnown RBP22.88■■□□□ 1.25
H3F3B-203ENST00000586518 CA1P00915 261 aaPredicted RBP22.88■■□□□ 1.25
H3F3B-203ENST00000586518 GFRA4Q9GZZ7 299 aa22.88■■□□□ 1.25
H3F3B-203ENST00000586518 CSPG4Q6UVK1 2322 aa22.87■■□□□ 1.25
H3F3B-203ENST00000586518 GLMPQ8WWB7 406 aa22.87■■□□□ 1.25
H3F3B-203ENST00000586518 NDFIP1Q9BT67 221 aa22.87■■□□□ 1.25
H3F3B-203ENST00000586518 ABCA12Q86UK0 2595 aa22.86■■□□□ 1.25
H3F3B-203ENST00000586518 FAM231BA6NCW3 169 aa22.86■■□□□ 1.25
H3F3B-203ENST00000586518 UNQ9165/PRO28630Q6UXU0 137 aa22.86■■□□□ 1.25
H3F3B-203ENST00000586518 CENPEQ02224 2701 aa22.86■■□□□ 1.25
H3F3B-203ENST00000586518 RBAKDNA6NC62 111 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 SNURFLB1AK76 121 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 K7EMT4 169 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 BMI1P35226 326 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 MRPL18Q9H0U6 180 aaKnown RBP22.85■■□□□ 1.25
H3F3B-203ENST00000586518 XKRY2A2RUG3 117 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 NPIPB6E9PJ23 425 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 CD5LO43866 347 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 CBLN1P23435 193 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 LINC00322Q6ZN03 302 aaPredicted RBP22.85■■□□□ 1.25
H3F3B-203ENST00000586518 GPHB5Q86YW7 130 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 ZC2HC1AQ96GY0 325 aa22.85■■□□□ 1.25
H3F3B-203ENST00000586518 IGKV2-40A0A087WW87 121 aaPredicted RBP22.84■■□□□ 1.25
H3F3B-203ENST00000586518 SPINK4O60575 86 aa22.84■■□□□ 1.25
H3F3B-203ENST00000586518 IGKV2D-40P01614 121 aaPredicted RBP22.84■■□□□ 1.25
H3F3B-203ENST00000586518 HLA-DQA1P01909 254 aa22.84■■□□□ 1.25
H3F3B-203ENST00000586518 ATP5L2Q7Z4Y8 100 aa22.84■■□□□ 1.25
H3F3B-203ENST00000586518 NUP35Q8NFH5 326 aa22.84■■□□□ 1.25
H3F3B-203ENST00000586518 NEU1Q99519 415 aa22.84■■□□□ 1.25
H3F3B-203ENST00000586518 DAZ1Q9NQZ3 744 aaKnown RBP22.84■■□□□ 1.25
H3F3B-203ENST00000586518 HIGD1CA8MV81 97 aa22.83■■□□□ 1.25
H3F3B-203ENST00000586518 S100A2P29034 98 aa22.83■■□□□ 1.25
H3F3B-203ENST00000586518 RAB4BP61018 213 aa22.83■■□□□ 1.25
H3F3B-203ENST00000586518 C8orf86Q6ZUL3 223 aa22.83■■□□□ 1.25
H3F3B-203ENST00000586518 Q8N2B8 174 aa22.83■■□□□ 1.25
H3F3B-203ENST00000586518 UFC1Q9Y3C8 167 aa22.83■■□□□ 1.25
H3F3B-203ENST00000586518 SCGB2A2Q13296 93 aa22.82■■□□□ 1.24
H3F3B-203ENST00000586518 MRPL54Q6P161 138 aaKnown RBP22.82■■□□□ 1.24
H3F3B-203ENST00000586518 OR2D3Q8NGH3 330 aa22.82■■□□□ 1.24
H3F3B-203ENST00000586518 WIPF2Q8TF74 440 aaPredicted RBP22.82■■□□□ 1.24
H3F3B-203ENST00000586518 C16orf92Q96LL3 132 aa22.82■■□□□ 1.24
H3F3B-203ENST00000586518 IGHV7-4-1A0A0J9YVY3 117 aa22.82■■□□□ 1.24
H3F3B-203ENST00000586518 IGFL4Q6B9Z1 124 aa22.82■■□□□ 1.24
H3F3B-203ENST00000586518 IL17RELQ6ZVW7 336 aa22.82■■□□□ 1.24
H3F3B-203ENST00000586518 COX8CQ7Z4L0 72 aa22.82■■□□□ 1.24
H3F3B-203ENST00000586518 APCP25054 2843 aa22.81■■□□□ 1.24
H3F3B-203ENST00000586518 TENM4Q6N022 2769 aa22.81■■□□□ 1.24
H3F3B-203ENST00000586518 COA6Q5JTJ3 125 aaKnown RBP22.81■■□□□ 1.24
H3F3B-203ENST00000586518 PRR25Q96S07 402 aa22.81■■□□□ 1.24
H3F3B-203ENST00000586518 SVEP1Q4LDE5 3571 aa22.8■■□□□ 1.24
H3F3B-203ENST00000586518 HLA-DMBP28068 263 aa22.8■■□□□ 1.24
H3F3B-203ENST00000586518 YAE1D1Q9NRH1 226 aa22.8■■□□□ 1.24
H3F3B-203ENST00000586518 ZNF705FA8MVS1 300 aaPredicted RBP22.79■■□□□ 1.24
H3F3B-203ENST00000586518 RPLP1P05386 114 aaKnown RBP22.79■■□□□ 1.24
H3F3B-203ENST00000586518 LINC00518Q8N0U6 118 aa22.79■■□□□ 1.24
H3F3B-203ENST00000586518 TMEM136Q6ZRR5 245 aa22.79■■□□□ 1.24
H3F3B-203ENST00000586518 RBPMS2Q6ZRY4 209 aaKnown RBP22.79■■□□□ 1.24
H3F3B-203ENST00000586518 HIST3H2BBQ8N257 126 aa22.79■■□□□ 1.24
H3F3B-203ENST00000586518 UBE2E2Q96LR5 201 aa22.79■■□□□ 1.24
H3F3B-203ENST00000586518 MAP1AP78559 2803 aaPredicted RBP22.78■■□□□ 1.24
H3F3B-203ENST00000586518 LGALS1P09382 135 aaKnown RBP22.78■■□□□ 1.24
H3F3B-203ENST00000586518 FAM162BQ5T6X4 162 aa22.78■■□□□ 1.24
H3F3B-203ENST00000586518 RNF152Q8N8N0 203 aa22.78■■□□□ 1.24
H3F3B-203ENST00000586518 VGLL1Q99990 258 aa22.78■■□□□ 1.24
H3F3B-203ENST00000586518 RNF182Q8N6D2 247 aa22.77■■□□□ 1.24
H3F3B-203ENST00000586518 C8orf49Q96NF6 230 aa22.77■■□□□ 1.24
H3F3B-203ENST00000586518 RHPN1-AS1Q9BWJ2 59 aa22.77■■□□□ 1.24
H3F3B-203ENST00000586518 SMPXQ9UHP9 88 aa22.77■■□□□ 1.24
H3F3B-203ENST00000586518 TRAV8-2A0A0B4J237 113 aa22.77■■□□□ 1.23
H3F3B-203ENST00000586518 C10orf99Q6UWK7 81 aa22.77■■□□□ 1.23
H3F3B-203ENST00000586518 MYOZ3Q8TDC0 251 aa22.77■■□□□ 1.23
H3F3B-203ENST00000586518 CREBBPQ92793 2442 aa22.76■■□□□ 1.23
H3F3B-203ENST00000586518 SAMD13Q5VXD3 122 aa22.76■■□□□ 1.23
H3F3B-203ENST00000586518 TCF24Q7RTU0 167 aa22.76■■□□□ 1.23
H3F3B-203ENST00000586518 DUX5Q96PT3 197 aa22.76■■□□□ 1.23
H3F3B-203ENST00000586518 RPL11P62913 178 aaKnown RBP22.75■■□□□ 1.23
H3F3B-203ENST00000586518 TM4SF20Q53R12 229 aa22.75■■□□□ 1.23
H3F3B-203ENST00000586518 TMEM78Q5T7P6 136 aa22.75■■□□□ 1.23
H3F3B-203ENST00000586518 Q6AWC8 147 aa22.75■■□□□ 1.23
H3F3B-203ENST00000586518 CSMD2Q7Z408 3487 aa22.75■■□□□ 1.23
H3F3B-203ENST00000586518 GPR61Q9BZJ8 451 aa22.74■■□□□ 1.23
H3F3B-203ENST00000586518 NRN1Q9NPD7 142 aa22.74■■□□□ 1.23
H3F3B-203ENST00000586518 APCSP02743 223 aa22.74■■□□□ 1.23
H3F3B-203ENST00000586518 CRISP2P16562 243 aa22.74■■□□□ 1.23
H3F3B-203ENST00000586518 CSMD1Q96PZ7 3565 aa22.73■■□□□ 1.23
H3F3B-203ENST00000586518 SMIM6P0DI80 62 aa22.73■■□□□ 1.23
H3F3B-203ENST00000586518 PRB4P10163 310 aaPredicted RBP22.73■■□□□ 1.23
H3F3B-203ENST00000586518 FOXA3P55318 350 aaPredicted RBP22.73■■□□□ 1.23
H3F3B-203ENST00000586518 RPS20P60866 119 aaKnown RBP22.73■■□□□ 1.23
H3F3B-203ENST00000586518 HBBP68871 147 aa22.73■■□□□ 1.23
H3F3B-203ENST00000586518 PGLYRP4Q96LB8 373 aa22.73■■□□□ 1.23
H3F3B-203ENST00000586518 TMEM189A5PLL7 270 aa22.72■■□□□ 1.23
H3F3B-203ENST00000586518 CRIP1P50238 77 aa22.72■■□□□ 1.23
H3F3B-203ENST00000586518 GFI1BQ5VTD9 330 aa22.72■■□□□ 1.23
H3F3B-203ENST00000586518 GTSF1Q8WW33 167 aa22.72■■□□□ 1.23
H3F3B-203ENST00000586518 ASCL2Q99929 193 aa22.72■■□□□ 1.23
H3F3B-203ENST00000586518 FRMD6-AS1P0C7T7 363 aa22.71■■□□□ 1.23
H3F3B-203ENST00000586518 PDZD11Q5EBL8 140 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms