RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 ZNF256Q9Y2P7 627 aaPredicted RBP12.67□□□□□ -0.38
HMG20B-215ENST00000585741 RBFOX3A6NFN3 312 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 OR11H12B2RN74 326 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 C11orf94C9JXX5 98 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 F6UZH7 168 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 CD81P60033 236 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 TOR2AQ5JU69 321 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 VAX2Q9UIW0 290 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 YTHDF2Q9Y5A9 579 aaKnown RBP12.66□□□□□ -0.38
HMG20B-215ENST00000585741 NOTCH3Q9UM47 2321 aa12.66□□□□□ -0.38
HMG20B-215ENST00000585741 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
HMG20B-215ENST00000585741 K7EQM0 130 aa12.65□□□□□ -0.38
HMG20B-215ENST00000585741 SOCS3O14543 225 aa12.65□□□□□ -0.38
HMG20B-215ENST00000585741 DEFB131AP59861 70 aa12.65□□□□□ -0.38
HMG20B-215ENST00000585741 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
HMG20B-215ENST00000585741 C5orf17Q8NAS9 161 aa12.65□□□□□ -0.38
HMG20B-215ENST00000585741 RPUSD4Q96CM3 377 aaKnown RBP12.65□□□□□ -0.38
HMG20B-215ENST00000585741 FAM210AQ96ND0 272 aa12.65□□□□□ -0.38
HMG20B-215ENST00000585741 NBEAL2Q6ZNJ1 2754 aa12.64□□□□□ -0.39
HMG20B-215ENST00000585741 RYR3Q15413 4870 aa12.64□□□□□ -0.39
HMG20B-215ENST00000585741 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
HMG20B-215ENST00000585741 ATP5G3P48201 142 aa12.64□□□□□ -0.39
HMG20B-215ENST00000585741 EBLN2Q6P2I7 272 aa12.64□□□□□ -0.39
HMG20B-215ENST00000585741 MRPL53Q96EL3 112 aaKnown RBP12.64□□□□□ -0.39
HMG20B-215ENST00000585741 LOC102723971A0A1B0GUV8 181 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 GGTLC3B5MD39 225 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 M0R3E3 92 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 MEF2BQ02080 365 aaPredicted RBP12.63□□□□□ -0.39
HMG20B-215ENST00000585741 PEA15Q15121 130 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 FAM24BQ8N5W8 94 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 OR10J6PQ8NGY7 276 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
HMG20B-215ENST00000585741 ZNF705FA8MVS1 300 aaPredicted RBP12.62□□□□□ -0.39
HMG20B-215ENST00000585741 PDE6DO43924 150 aa12.62□□□□□ -0.39
HMG20B-215ENST00000585741 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
HMG20B-215ENST00000585741 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
HMG20B-215ENST00000585741 C20orf173Q96LM9 149 aa12.62□□□□□ -0.39
HMG20B-215ENST00000585741 RARRES2Q99969 163 aa12.62□□□□□ -0.39
HMG20B-215ENST00000585741 PPP1R14DQ9NXH3 145 aa12.62□□□□□ -0.39
HMG20B-215ENST00000585741 EPDR1Q9UM22 224 aa12.62□□□□□ -0.39
HMG20B-215ENST00000585741 SERTM2A0A1B0GWG4 89 aa12.61□□□□□ -0.39
HMG20B-215ENST00000585741 CD7P09564 240 aa12.61□□□□□ -0.39
HMG20B-215ENST00000585741 AKR1C3P42330 323 aa12.61□□□□□ -0.39
HMG20B-215ENST00000585741 GNG5P63218 68 aa12.61□□□□□ -0.39
HMG20B-215ENST00000585741 ARL6IP6Q8N6S5 226 aa12.61□□□□□ -0.39
HMG20B-215ENST00000585741 TREM1Q9NP99 234 aa12.61□□□□□ -0.39
HMG20B-215ENST00000585741 RAB19A4D1S5 217 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 DUSP14O95147 198 aaKnown RBP12.6□□□□□ -0.39
HMG20B-215ENST00000585741 CEBPGP53567 150 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 UBE2G1P62253 170 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 HIST1H1AQ02539 215 aaPredicted RBP12.6□□□□□ -0.39
HMG20B-215ENST00000585741 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 GOLT1AQ6ZVE7 132 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 CYB561D1Q8N8Q1 229 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 PRR25Q96S07 402 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 FAM110AQ9BQ89 295 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 ATG101Q9BSB4 218 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 MED9Q9NWA0 146 aa12.6□□□□□ -0.39
HMG20B-215ENST00000585741 DNAH9Q9NYC9 4486 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 DIRC3C9JPN6 131 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 PEX7O00628 323 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 TCRAP04437 139 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
HMG20B-215ENST00000585741 EGFEM1PQ0D2K5 195 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 ODF3L2Q3SX64 289 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 ACTL10Q5JWF8 245 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 COMMD7Q86VX2 200 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 APRG1Q8IVJ8 170 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 STHQ8IWL8 128 aa12.59□□□□□ -0.39
HMG20B-215ENST00000585741 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
HMG20B-215ENST00000585741 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
HMG20B-215ENST00000585741 PRB4P10163 310 aaPredicted RBP12.58□□□□□ -0.4
HMG20B-215ENST00000585741 CCDC28AQ8IWP9 274 aa12.58□□□□□ -0.4
HMG20B-215ENST00000585741 OR4B1Q8NGF8 309 aa12.58□□□□□ -0.4
HMG20B-215ENST00000585741 OR8A1Q8NGG7 326 aa12.58□□□□□ -0.4
HMG20B-215ENST00000585741 SMDT1Q9H4I9 107 aa12.58□□□□□ -0.4
HMG20B-215ENST00000585741 SCO2A0A1W2PP80 73 aa12.57□□□□□ -0.4
HMG20B-215ENST00000585741 RBAKDNA6NC62 111 aa12.57□□□□□ -0.4
HMG20B-215ENST00000585741 KNCNA6PVL3 124 aa12.57□□□□□ -0.4
HMG20B-215ENST00000585741 F6UB75 175 aa12.57□□□□□ -0.4
HMG20B-215ENST00000585741 SAV1Q9H4B6 383 aaPredicted RBP12.57□□□□□ -0.4
HMG20B-215ENST00000585741 TUBA4BQ9H853 241 aa12.57□□□□□ -0.4
HMG20B-215ENST00000585741 A0A0J9YX75 114 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 LINC00862A6NCI5 91 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 FBLL1A6NHQ2 334 aaKnown RBP12.56□□□□□ -0.4
HMG20B-215ENST00000585741 PRAC2D3DTV9 90 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 TMEM250H0YL14 139 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 S100A9P06702 114 aaKnown RBP12.56□□□□□ -0.4
HMG20B-215ENST00000585741 DEFB1P60022 68 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 KRTAP10-11P60412 298 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 MRAPQ8TCY5 172 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 NDFIP1Q9BT67 221 aa12.56□□□□□ -0.4
HMG20B-215ENST00000585741 AURKAIP1Q9NWT8 199 aaPredicted RBP12.56□□□□□ -0.4
HMG20B-215ENST00000585741 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 IGKV3-20P01619 116 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 ZNF705DP0CH99 300 aaPredicted RBP12.55□□□□□ -0.4
HMG20B-215ENST00000585741 ZNF705BP0CI00 300 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms