RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 KLRD1Q13241 179 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 NUDT3O95989 172 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 PSG9Q00887 426 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 BVES-AS1Q5T3Y7 98 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 COX8CQ7Z4L0 72 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ARHGAP32A7KAX9 2087 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TMEM189A5PLL7 270 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 K7ENP7 123 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 PRTN3P24158 256 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ARPC1AQ92747 370 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 C21orf62Q9NYP8 219 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 U3KQK5 164 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ANKHD1Q8IWZ3 2542 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 IGHV2-70DA0A0C4DH43 119 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 SH2D1AO60880 128 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 NDPQ00604 133 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
CDK5RAP3-237ENST00000585163 LOC105371242A0A075B767 164 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 D6R8Y8 96 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 NBL1P41271 181 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FAM104BQ5XKR9 115 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TLN1Q9Y490 2541 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 A0A096LNJ9 63 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TMEM213A2RRL7 107 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FAM106CPP0CH98 169 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 RPL7P18124 248 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FAM106AQ4KMX7 169 aa11.09□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TMSB15BA0A087X1C1 80 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 PRR25Q96S07 402 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 SIGLEC8Q9NYZ4 499 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 THYN1Q9P016 225 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 ABCA4P78363 2273 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 IGKV2-40A0A087WW87 121 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 A0A1W2PRD5 423 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 A0A1W2PRF3 423 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 A0A1W2PRM7 423 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 TAX1BP3O14907 124 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 NCR2O95944 276 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 IGKV2D-40P01614 121 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 HIST1H1AQ02539 215 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 AMN1Q8IY45 258 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 PRELID3AQ96N28 172 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 SPTBN2O15020 2390 aa11.08□□□□□ -0.64
CDK5RAP3-237ENST00000585163 FBLL1A6NHQ2 334 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 NCBP2LA6PVI3 153 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 COX8AP10176 69 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 LOXL1Q08397 574 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CCDC144NLQ6NUI1 221 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 Q8N6K4 173 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CSMD1Q96PZ7 3565 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 MUC21A0A0G2JKD1 596 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 MUC21A0A140T8X8 626 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CTSGP08311 255 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 MUC21Q5SSG8 566 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 DYNAPQ8N1N2 210 aa11.07□□□□□ -0.64
CDK5RAP3-237ENST00000585163 LOC389332A0A1B0GUA5 103 aa11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 EGR2P11161 476 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 EBI3Q14213 229 aa11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 VMO1Q7Z5L0 202 aa11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
CDK5RAP3-237ENST00000585163 A0A087X0K7 114 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 IGHG4P01861 327 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 VAMP3Q15836 100 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 DPF1Q92782 380 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 RABAC1Q9UI14 185 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 SMAD5-AS1Q9Y6J3 95 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 RELNP78509 3460 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 OOSP1A8MZH6 123 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CCL21O00585 134 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 SCGB2A1O75556 95 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 GPR183P32249 361 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 RPS20P60866 119 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 RHOGP84095 191 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 PAX8Q06710 450 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 FOXC1Q12948 553 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 C2orf91Q6ZV80 131 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 VGLL1Q99990 258 aa11.05□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CDSNQ15517 529 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 C11orf71Q6IPW1 123 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 ZNF575Q86XF7 245 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 OR4C5Q8NGB2 326 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 OR8A1Q8NGG7 326 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 Q8TAT8 98 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 IGLC6P0CF74 106 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 LGALS9CQ6DKI2 356 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms