RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
CHD9-216ENST00000565803 IL36BQ9NZH7 164 aa2.35□□□□□ -2.03
CHD9-216ENST00000565803 U3KQA8 63 aa2.35□□□□□ -2.03
CHD9-216ENST00000565803 POLQO75417 2590 aa2.35□□□□□ -2.03
CHD9-216ENST00000565803 CELSR3Q9NYQ7 3312 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 MED13LQ71F56 2210 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 MT-ATP8P03928 68 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 GATA2P23769 480 aaPredicted RBP2.34□□□□□ -2.03
CHD9-216ENST00000565803 ATP5G2Q06055 141 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 KIAA1644Q3SXP7 199 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 C10orf105Q8TEF2 133 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 TSLPQ969D9 159 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 ZNF747Q9BV97 191 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 IER3IP1Q9Y5U9 82 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 SPCS1Q9Y6A9 102 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 CACNA1DQ01668 2161 aa2.34□□□□□ -2.03
CHD9-216ENST00000565803 HIST1H2BKO60814 126 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 IL5P05113 134 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 HIST1H2BJP06899 126 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 IGLC1P0CG04 106 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 MPV17L2Q567V2 206 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 SOSTDC1Q6X4U4 206 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 FAM72BQ86X60 149 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 ATOH7Q8N100 152 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 C3orf22Q8N5N4 141 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 NRACQ8N912 160 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 DCANP1Q8TF63 244 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 VOPP1Q96AW1 172 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 ZNF696Q9H7X3 374 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 CCL28Q9NRJ3 127 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 C21orf62Q9NYP8 219 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 USP9YO00507 2555 aaPredicted RBP2.34□□□□□ -2.04
CHD9-216ENST00000565803 NUMA1Q14980 2115 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 IGKV1-27A0A075B6S5 117 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 IGLV5-52A0A0A0MRZ9 124 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 IGHV1-58A0A0C4DH39 117 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 PGLYRP1O75594 196 aaPredicted RBP2.34□□□□□ -2.04
CHD9-216ENST00000565803 NXPH4O95158 308 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 CKS2P33552 79 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 RPL22P35268 128 aaKnown RBP2.34□□□□□ -2.04
CHD9-216ENST00000565803 FUSP35637 526 aaKnown RBP eCLIP2.34□□□□□ -2.04
CHD9-216ENST00000565803 LOXL1Q08397 574 aaPredicted RBP2.34□□□□□ -2.04
CHD9-216ENST00000565803 ZNF816Q0VGE8 651 aaPredicted RBP2.34□□□□□ -2.04
CHD9-216ENST00000565803 DPPA3Q6W0C5 159 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 LINC00299Q6ZSB3 139 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 HIST3H2BBQ8N257 126 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 FAM57AQ8TBR7 257 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 FAM168AQ92567 244 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 SDF2Q99470 211 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 TAC3Q9UHF0 121 aa2.34□□□□□ -2.04
CHD9-216ENST00000565803 MYO18AQ92614 2054 aaKnown RBP2.33□□□□□ -2.04
CHD9-216ENST00000565803 LAMA1P25391 3075 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 IGHV1OR15-1A0A075B7D0 117 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 A6NIN4 97 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 PRM2P04554 102 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 SCN1AP35498 2009 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 DYNLT3P51808 116 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 RPS11P62280 158 aaKnown RBP eCLIP2.33□□□□□ -2.04
CHD9-216ENST00000565803 ENDOGQ14249 297 aaKnown RBP2.33□□□□□ -2.04
CHD9-216ENST00000565803 Q6AWC8 147 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 RPL7L1Q6DKI1 246 aaKnown RBP2.33□□□□□ -2.04
CHD9-216ENST00000565803 AMTNQ6UX39 209 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 UNQ9165/PRO28630Q6UXU0 137 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 WFDC5Q8TCV5 224 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 DNAH3Q8TD57 4116 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 DSCR8Q96T75 97 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 MRPL32Q9BYC8 188 aaKnown RBP2.33□□□□□ -2.04
CHD9-216ENST00000565803 TMEM242Q9NWH2 141 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 DNAH1Q9P2D7 4330 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 F8P00451 2351 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 MED13Q9UHV7 2174 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 TRAV12-2A0A075B6T6 113 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 UPK1AO00322 258 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 PEX7O00628 323 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 CD5LO43866 347 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 LINC00205P59089 165 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 LMO4P61968 165 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 KIAA0040Q15053 153 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 CDK5R1Q15078 307 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 IGFBP7Q16270 282 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 RRN3P1Q2M238 152 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 FAM72AQ5TYM5 149 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 TMEM256Q8N2U0 113 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 C10orf111Q8N326 155 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 SIGLECL1Q8N7X8 197 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 NUP35Q8NFH5 326 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 OR10AG1Q8NH19 301 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 ZNF721Q8TF20 911 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 SPTSSAQ969W0 71 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 DPH3Q96FX2 82 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 HIST1H2BLQ99880 126 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 KRTAP9-2Q9BYQ4 174 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 PLEKHF2Q9H8W4 249 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 DPM3Q9P2X0 92 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 LRRK2Q5S007 2527 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 TRIP11Q15643 1979 aa2.33□□□□□ -2.04
CHD9-216ENST00000565803 MCRIP1C9JLW8 97 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 CHTF8P0CG12 524 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 ZNF136P52737 540 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 LINC00313P59037 77 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms