RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 OR5AS1Q8N127 324 aa1.53□□□□□ -2.16
LSM6P2-201ENST00000552208 LRRC18Q8N456 261 aa1.53□□□□□ -2.16
LSM6P2-201ENST00000552208 OR5A2Q8NGI9 324 aa1.53□□□□□ -2.16
LSM6P2-201ENST00000552208 BRK1Q8WUW1 75 aa1.53□□□□□ -2.16
LSM6P2-201ENST00000552208 C4orf3Q8WVX3 66 aa1.53□□□□□ -2.16
LSM6P2-201ENST00000552208 MAFIPQ8WZ33 124 aa1.53□□□□□ -2.16
LSM6P2-201ENST00000552208 HIGD1AQ9Y241 93 aa1.53□□□□□ -2.16
LSM6P2-201ENST00000552208 ANAPC1Q9H1A4 1944 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 COL4A1P02462 1669 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 DLC1Q96QB1 1528 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 DSPPQ9NZW4 1301 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 LOC110117498A0A087WWA1 95 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 CCDC160A6NGH7 325 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 C5orf67F2Z3F1 127 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 M0QZK8 103 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 CCL16O15467 120 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 DPM2O94777 84 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 CXCL8P10145 99 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 CRYGSP22914 178 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 SRP9P49458 86 aaKnown RBP1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 S100A12P80511 92 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 LINC00269Q8N2A0 174 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 OR4C12Q96R67 309 aa1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 DIDO1Q9BTC0 2240 aaKnown RBP1.52□□□□□ -2.17
LSM6P2-201ENST00000552208 C9orf170A2RU37 121 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 CD2P06729 351 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 DBIP07108 87 aaKnown RBP1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 TEX261Q6UWH6 196 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 TCTE3Q8IZS6 198 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 CLEC2BQ92478 149 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 LINC00052Q96N35 136 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 KLK9Q9UKQ9 250 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 TPRKBQ9Y3C4 175 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 U3KQ87 197 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 NUP210Q8TEM1 1887 aaPredicted RBP1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 COL11A1P12107 1806 aaPredicted RBP1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 LAMB2P55268 1798 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 CEP152O94986 1710 aa1.51□□□□□ -2.17
LSM6P2-201ENST00000552208 ZCCHC6Q5VYS8 1495 aaKnown RBP1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 ANKRD31Q8N7Z5 1873 aa1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 M0R2N4 97 aa1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 SAA1P0DJI8 122 aaPredicted RBP1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 CCL4P13236 92 aa1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 SMCO1Q147U7 214 aa1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 DEFB115Q30KQ5 88 aa1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 OR51A4Q8NGJ6 313 aa1.5□□□□□ -2.17
LSM6P2-201ENST00000552208 CPDO75976 1380 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 TRBV6-4A0A1B0GX49 114 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 INE1O15225 51 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 OR2H2O95918 312 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 MT-ND4LP03901 98 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 TPT1P13693 172 aaKnown RBP1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 CMPK1P30085 196 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 CKS1BP61024 79 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 FAM19A2Q8N3H0 131 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 FKBP11Q9NYL4 201 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 HSPB8Q9UJY1 196 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 MYO5AQ9Y4I1 1855 aaKnown RBP1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 LAMB4A4D0S4 1761 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 COL24A1Q17RW2 1714 aa1.49□□□□□ -2.17
LSM6P2-201ENST00000552208 SORL1Q92673 2214 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 ALPK2Q86TB3 2170 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 XIRP1Q702N8 1843 aaKnown RBP1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 IGKV3D-7A0A0C4DH55 119 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 IGKV3OR2-268A0A0C4DH90 116 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 UQCRQO14949 82 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 TRACP01848 142 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 HBDP02042 147 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 PRB1P04280 392 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 SLC25A5P05141 298 aaKnown RBP1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 CIRBPQ14011 172 aaKnown RBP1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 HAGHLQ6PII5 290 aaPredicted RBP1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 FOXI2Q6ZQN5 318 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 BORCS5Q969J3 196 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 NABP2Q9BQ15 211 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 CDC42SE1Q9NRR8 79 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 ORMDL1Q9P0S3 153 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 CR1P17927 2039 aa1.48□□□□□ -2.17
LSM6P2-201ENST00000552208 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 C5orf58C9J3I9 102 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 TCRAP04437 139 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 PAEPP09466 180 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 QRFPP83859 136 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 SMIM21Q3B7S5 101 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 TMEM244Q5VVB8 128 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 ZCCHC23Q6ZST2 131 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 OR10AG1Q8NH19 301 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 CST11Q9H112 138 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 TMEM138Q9NPI0 162 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 CECR2Q9BXF3 1484 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 MYH10P35580 1976 aa1.47□□□□□ -2.17
LSM6P2-201ENST00000552208 FER1L6Q2WGJ9 1857 aa1.46□□□□□ -2.18
LSM6P2-201ENST00000552208 COL1A1P02452 1464 aaPredicted RBP1.46□□□□□ -2.18
LSM6P2-201ENST00000552208 ZNF727A8MUV8 499 aa1.46□□□□□ -2.18
LSM6P2-201ENST00000552208 NUPR1O60356 82 aa1.46□□□□□ -2.18
LSM6P2-201ENST00000552208 HMGN1P05114 100 aa1.46□□□□□ -2.18
LSM6P2-201ENST00000552208 SLC25A4P12235 298 aa1.46□□□□□ -2.18
LSM6P2-201ENST00000552208 COX7CP15954 63 aa1.46□□□□□ -2.18
LSM6P2-201ENST00000552208 MIR22HGQ0VDD5 57 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms