RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 CIDEAO60543 219 aa10.06□□□□□ -0.8
CALCOCO1-217ENST00000549935 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
CALCOCO1-217ENST00000549935 PPP1R27Q86WC6 154 aa10.06□□□□□ -0.8
CALCOCO1-217ENST00000549935 PRSS33Q8NF86 280 aa10.06□□□□□ -0.8
CALCOCO1-217ENST00000549935 APC2O95996 2303 aa10.05□□□□□ -0.8
CALCOCO1-217ENST00000549935 FABP2P12104 132 aa10.05□□□□□ -0.8
CALCOCO1-217ENST00000549935 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
CALCOCO1-217ENST00000549935 MRPL51Q4U2R6 128 aaKnown RBP10.05□□□□□ -0.8
CALCOCO1-217ENST00000549935 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
CALCOCO1-217ENST00000549935 MALRD1Q5VYJ5 2156 aa10.05□□□□□ -0.8
CALCOCO1-217ENST00000549935 LOC389332A0A1B0GUA5 103 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 FBLL1A6NHQ2 334 aaKnown RBP10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 VSTM5A8MXK1 200 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 NDUFS7O75251 213 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 GFRALQ6UXV0 394 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 RNF5Q99942 180 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 HILPDAQ9Y5L2 63 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 SPTBN2O15020 2390 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 TPRP12270 2363 aaKnown RBP10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 E7EQL1 145 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 S100A7AQ86SG5 101 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 POLEQ07864 2286 aa10.04□□□□□ -0.8
CALCOCO1-217ENST00000549935 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 SCGB1A1P11684 91 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 PCP2Q8IVA1 136 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 ZNF491Q8N8L2 437 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 WI2-2373I1.2A0A1W2PRP0 233 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 RBP4P02753 201 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 S100A7P31151 101 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 SRSF2Q01130 221 aaKnown RBP10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 PLGLAQ15195 96 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 TPPP3Q9BW30 176 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
CALCOCO1-217ENST00000549935 IGHV1-3A0A0C4DH29 117 aa10.02□□□□□ -0.81
CALCOCO1-217ENST00000549935 LYNX1G3V0Z9 82 aa10.02□□□□□ -0.81
CALCOCO1-217ENST00000549935 K7EIM0 57 aa10.02□□□□□ -0.81
CALCOCO1-217ENST00000549935 SH2D1AO60880 128 aa10.02□□□□□ -0.81
CALCOCO1-217ENST00000549935 LYNX1P0DP58 116 aa10.02□□□□□ -0.81
CALCOCO1-217ENST00000549935 RNF125Q96EQ8 232 aa10.02□□□□□ -0.81
CALCOCO1-217ENST00000549935 C8orf49Q96NF6 230 aa10.02□□□□□ -0.81
CALCOCO1-217ENST00000549935 NPYP01303 97 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 COX7A1P24310 79 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 CKS2P33552 79 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 NMUP48645 174 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 Q8NA96 180 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 FBXL15Q9H469 300 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 AAMDCQ9H7C9 122 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 BUB1B-PAK6H3BSN5 160 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 IGLC6P0CF74 106 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.817e-7■■□□□ 11.7
CALCOCO1-217ENST00000549935 PRR30Q53SZ7 412 aaPredicted RBP10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 RALYQ9UKM9 306 aaKnown RBP10.01□□□□□ -0.81
CALCOCO1-217ENST00000549935 EVI2AP22794 236 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 PHLDA1Q8WV24 401 aaPredicted RBP10□□□□□ -0.81
CALCOCO1-217ENST00000549935 NAA38Q9BRA0 125 aaKnown RBP10□□□□□ -0.81
CALCOCO1-217ENST00000549935 TM2D2Q9BX73 214 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 DKK2Q9UBU2 259 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 SMPXQ9UHP9 88 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 LRBAP50851 2863 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 M0R3E3 92 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 FCER1GP30273 86 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 ODF1Q14990 250 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
CALCOCO1-217ENST00000549935 ASCL2Q99929 193 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 VGLL1Q99990 258 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 RAB1BQ9H0U4 201 aa10□□□□□ -0.81
CALCOCO1-217ENST00000549935 RELNP78509 3460 aa9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 PRB4P10163 310 aaPredicted RBP9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 BMI1P35226 326 aa9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 PRSS57Q6UWY2 283 aa9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 ZNF562Q6V9R5 426 aa9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 BCL6BQ8N143 479 aaPredicted RBP9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 RPEQ96AT9 228 aa9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 MAP1LC3AQ9H492 121 aa9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 NXT2Q9NPJ8 142 aaKnown RBP9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 CSMD1Q96PZ7 3565 aa9.99□□□□□ -0.81
CALCOCO1-217ENST00000549935 IL4P05112 153 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 RNF185Q96GF1 192 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 PSMG3-AS1Q96PY0 264 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 PRR25Q96S07 402 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 DCHS2Q6V1P9 2916 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 PPIAL4GP0DN37 164 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 EGR2P11161 476 aaPredicted RBP9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 FCGR2BP31994 310 aaPredicted RBP9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 FXYD2P54710 66 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 SAMD13Q5VXD3 122 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 CHAC1Q9BUX1 264 aa9.98□□□□□ -0.81
CALCOCO1-217ENST00000549935 PPIAL4CA0A0B4J2A2 164 aa9.97□□□□□ -0.81
CALCOCO1-217ENST00000549935 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO1-217ENST00000549935 ATP5LO75964 103 aa9.97□□□□□ -0.81
CALCOCO1-217ENST00000549935 CNIH1O95406 144 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms