RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 A0A0J9YY99 117 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 LYRM1O43325 122 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 GLYATL3Q5SZD4 288 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 FOXI2Q6ZQN5 318 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 FAM213BQ8TBF2 198 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 MALSU1Q96EH3 234 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 SIGMAR1Q99720 223 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 PKD1L1Q8TDX9 2849 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 FAT1Q14517 4588 aa-0.55□□□□□ -2.5
ATM-217ENST00000531957 COL6A3P12111 3177 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 KIF1BO60333 1816 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 DUXBA0A1W2PPF3 345 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 HMGB3O15347 200 aaKnown RBP-0.56□□□□□ -2.5
ATM-217ENST00000531957 BANF1O75531 89 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 HAND1O96004 215 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 IFNA4P05014 189 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 RPS3P23396 243 aaKnown RBP eCLIP-0.56□□□□□ -2.5
ATM-217ENST00000531957 SPA17Q15506 151 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 XAF1Q6GPH4 301 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 GOLT1AQ6ZVE7 132 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 VMO1Q7Z5L0 202 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 MAP1LC3BQ9GZQ8 125 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 NMNAT1Q9HAN9 279 aaPredicted RBP-0.56□□□□□ -2.5
ATM-217ENST00000531957 BSNQ9UPA5 3926 aa-0.56□□□□□ -2.5
ATM-217ENST00000531957 CHD9Q3L8U1 2897 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 F8P00451 2351 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 COL24A1Q17RW2 1714 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 NEBP20929 6669 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 LOC107984156A0A0G2JMH3 177 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 RER1O15258 196 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 CRHP06850 196 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 TMBIM6P55061 237 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 DIAPH2-AS1Q14236 149 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 ZNF56Q15929 161 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 VMA21Q3ZAQ7 101 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 ARL17AQ8IVW1 177 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 GRPEL2Q8TAA5 225 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 NAT8BQ9UHF3 227 aa-0.57□□□□□ -2.5
ATM-217ENST00000531957 AHCTF1Q8WYP5 2266 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 NUP98P52948 1817 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 SPRR2DP22532 72 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 KRTAP20-2Q3LI61 65 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 PPTC7Q8NI37 304 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 CST11Q9H112 138 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 FAM32AQ9Y421 112 aaKnown RBP-0.58□□□□□ -2.5
ATM-217ENST00000531957 MIA2Q96PC5 1412 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 RBBP6Q7Z6E9 1792 aaKnown RBP-0.58□□□□□ -2.5
ATM-217ENST00000531957 LRP1BQ9NZR2 4599 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 NCOR1O75376 2440 aa-0.58□□□□□ -2.5
ATM-217ENST00000531957 DOCK4Q8N1I0 1966 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 CEP164Q9UPV0 1460 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 ALMS1Q8TCU4 4167 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 CXCL1P09341 107 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 EVI2AP22794 236 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 MT4P47944 62 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 ARPP19P56211 112 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 TAF1AQ15573 450 aaPredicted RBP-0.59□□□□□ -2.5
ATM-217ENST00000531957 NEDD8Q15843 81 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 KRTAP19-8Q3LI54 63 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 LINC00208Q96KT6 92 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 CCDC144AA2RUR9 1427 aa-0.59□□□□□ -2.5
ATM-217ENST00000531957 USH2AO75445 5202 aa-0.6□□□□□ -2.5
ATM-217ENST00000531957 SETXQ7Z333 2677 aaKnown RBP-0.6□□□□□ -2.5
ATM-217ENST00000531957 A6NN06 94 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 IGHV3-30P01768 117 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 TCRBP04435 133 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 IGHV3-30-5P0DP03 117 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 IDO1P14902 403 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 LIN52Q52LA3 116 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 OR10X1Q8NGY0 326 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 AP1S3Q96PC3 154 aa-0.6□□□□□ -2.51
ATM-217ENST00000531957 PARD6GQ9BYG4 376 aaPredicted RBP-0.6□□□□□ -2.51
ATM-217ENST00000531957 FLGP20930 4061 aaPredicted RBP-0.6□□□□□ -2.51
ATM-217ENST00000531957 A0A1W2PRS3 328 aa-0.61□□□□□ -2.51
ATM-217ENST00000531957 K7ERJ3 54 aa-0.61□□□□□ -2.51
ATM-217ENST00000531957 FXYD1O00168 92 aa-0.61□□□□□ -2.51
ATM-217ENST00000531957 LSM6P62312 80 aaKnown RBP-0.61□□□□□ -2.51
ATM-217ENST00000531957 SNRPD3P62318 126 aaKnown RBP-0.61□□□□□ -2.51
ATM-217ENST00000531957 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.61□□□□□ -2.51
ATM-217ENST00000531957 PPP1R14BQ96C90 147 aa-0.61□□□□□ -2.51
ATM-217ENST00000531957 HERC2O95714 4834 aa-0.61□□□□□ -2.51
ATM-217ENST00000531957 ZNF292O60281 2723 aa-0.62□□□□□ -2.51
ATM-217ENST00000531957 IFITM1P13164 125 aa-0.62□□□□□ -2.51
ATM-217ENST00000531957 PTRHD1Q6GMV3 140 aaKnown RBP-0.62□□□□□ -2.51
ATM-217ENST00000531957 ZCCHC23Q6ZST2 131 aa-0.62□□□□□ -2.51
ATM-217ENST00000531957 JMJD1CQ15652 2540 aa-0.62□□□□□ -2.51
ATM-217ENST00000531957 CSMD3Q7Z407 3707 aa-0.62□□□□□ -2.51
ATM-217ENST00000531957 NBEAL1Q6ZS30 2694 aa-0.62□□□□□ -2.51
ATM-217ENST00000531957 MYO7AQ13402 2215 aa-0.62□□□□□ -2.51
ATM-217ENST00000531957 HIST1H2BKO60814 126 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 IFNA14P01570 189 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 GYPBP06028 91 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 HIST1H2BJP06899 126 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 ITGB3BPQ13352 177 aaPredicted RBP-0.63□□□□□ -2.51
ATM-217ENST00000531957 HACD4Q5VWC8 232 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 FAM216BQ8N7L0 139 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 EFCAB11Q9BUY7 163 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 OR2J1Q9GZK6 312 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 ADCY9O60503 1353 aa-0.63□□□□□ -2.51
ATM-217ENST00000531957 HIVEP1P15822 2718 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms