RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 DPTQ07507 201 aa5.03□□□□□ -1.6
SDC2-208ENST00000523877 SPANXN4Q5MJ08 99 aa5.03□□□□□ -1.6
SDC2-208ENST00000523877 FAM219BQ5XKK7 198 aa5.03□□□□□ -1.6
SDC2-208ENST00000523877 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
SDC2-208ENST00000523877 FAM19A3Q7Z5A8 133 aa5.03□□□□□ -1.6
SDC2-208ENST00000523877 SLC25A22Q9H936 323 aa5.03□□□□□ -1.6
SDC2-208ENST00000523877 RAI1Q7Z5J4 1906 aaPredicted RBP5.03□□□□□ -1.6
SDC2-208ENST00000523877 MED12LQ86YW9 2145 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 MIA3Q5JRA6 1907 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 RBMY1BA6NDE4 496 aaKnown RBP5.02□□□□□ -1.61
SDC2-208ENST00000523877 RBMY1EA6NEQ0 496 aaKnown RBP5.02□□□□□ -1.61
SDC2-208ENST00000523877 CEBPZOSA8MTT3 80 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 LEPROTL1O95214 131 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 RBMY1DP0C7P1 496 aaKnown RBP5.02□□□□□ -1.61
SDC2-208ENST00000523877 RBMY1A1P0DJD3 496 aaKnown RBP5.02□□□□□ -1.61
SDC2-208ENST00000523877 ZNF56Q15929 161 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 MSMPQ1L6U9 139 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 ZNF678Q5SXM1 525 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 FAM104BQ5XKR9 115 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 C6orf223Q8N319 242 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 DEFB123Q8N688 67 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 C18orf12Q96KH6 178 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 SLC25A2Q9BXI2 301 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 SMCHD1A6NHR9 2005 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 CENPFP49454 3210 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 EXPH5Q8NEV8 1989 aa5.02□□□□□ -1.61
SDC2-208ENST00000523877 IGKV1D-8A0A087WSZ0 117 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 NDUFC1O43677 76 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 NPYP01303 97 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 ZNF883P0CG24 379 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 EFNA4P52798 201 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 HMGA2P52926 109 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 CXCL6P80162 114 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 ATP1A1-AS1Q5TC04 95 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 PCSK4Q6UW60 755 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 NKAPP1Q8N9T2 125 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 DYNLRB1Q9NP97 96 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 IL36RNQ9UBH0 155 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 RALGAPA1Q6GYQ0 2036 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 SCN2AQ99250 2005 aa5.01□□□□□ -1.61
SDC2-208ENST00000523877 DUOX1Q9NRD9 1551 aa5□□□□□ -1.61
SDC2-208ENST00000523877 ARID1BQ8NFD5 2236 aaPredicted RBP5□□□□□ -1.61
SDC2-208ENST00000523877 IGHV3OR15-7A0A075B7D8 119 aa5□□□□□ -1.61
SDC2-208ENST00000523877 TRAV16A0A0A6YYK6 109 aaPredicted RBP5□□□□□ -1.61
SDC2-208ENST00000523877 TCRBV4S1A1TA0A5B7 111 aa5□□□□□ -1.61
SDC2-208ENST00000523877 H3BMM0 161 aa5□□□□□ -1.61
SDC2-208ENST00000523877 K7ERJ3 54 aa5□□□□□ -1.61
SDC2-208ENST00000523877 WNT9BO14905 357 aa5□□□□□ -1.61
SDC2-208ENST00000523877 CSRP3P50461 194 aa5□□□□□ -1.61
SDC2-208ENST00000523877 DYNLT3P51808 116 aa5□□□□□ -1.61
SDC2-208ENST00000523877 FXYD2P54710 66 aa5□□□□□ -1.61
SDC2-208ENST00000523877 B3GALT5-AS1P59052 145 aa5□□□□□ -1.61
SDC2-208ENST00000523877 RPL18Q07020 188 aaKnown RBP5□□□□□ -1.61
SDC2-208ENST00000523877 ZNF876PQ49A33 203 aa5□□□□□ -1.61
SDC2-208ENST00000523877 ZFP2Q6ZN57 461 aa5□□□□□ -1.61
SDC2-208ENST00000523877 PDPNQ86YL7 162 aa5□□□□□ -1.61
SDC2-208ENST00000523877 SPTSSAQ969W0 71 aa5□□□□□ -1.61
SDC2-208ENST00000523877 UBE2WQ96B02 151 aa5□□□□□ -1.61
SDC2-208ENST00000523877 TXNDC17Q9BRA2 123 aa5□□□□□ -1.61
SDC2-208ENST00000523877 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
SDC2-208ENST00000523877 CXCL16Q9H2A7 254 aa5□□□□□ -1.61
SDC2-208ENST00000523877 C6orf106Q9H6K1 298 aaPredicted RBP5□□□□□ -1.61
SDC2-208ENST00000523877 MAP6D1Q9H9H5 199 aa5□□□□□ -1.61
SDC2-208ENST00000523877 ZNF492Q9P255 531 aa5□□□□□ -1.61
SDC2-208ENST00000523877 LY96Q9Y6Y9 160 aa5□□□□□ -1.61
SDC2-208ENST00000523877 HEATR5AQ86XA9 2040 aa5□□□□□ -1.61
SDC2-208ENST00000523877 COL1A1P02452 1464 aaPredicted RBP5□□□□□ -1.61
SDC2-208ENST00000523877 PRUNE2Q8WUY3 3088 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 IGHV1OR21-1A0A087WYE8 117 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 IGKV1D-13A0A0B4J2D9 117 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 MYMXA0A1B0GTQ4 84 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 SLC25A20O43772 301 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 NXPH4O95158 308 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 IGKV1-13P0DP09 117 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 S100A4P26447 101 aaKnown RBP4.99□□□□□ -1.61
SDC2-208ENST00000523877 CKS2P33552 79 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 ZNF80P51504 273 aaPredicted RBP4.99□□□□□ -1.61
SDC2-208ENST00000523877 UBE2D3P61077 147 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 UBE2D2P62837 147 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 ZNF117Q03924 483 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 INSL4Q14641 139 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 DEFB121Q5J5C9 76 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 RUSC1-AS1Q66K80 236 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 C7orf65Q6ZTY9 151 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 FAM19A2Q8N3H0 131 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 Q8N8P6 123 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 ABHD14BQ96IU4 210 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 LINC00588Q9Y4M8 146 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 SCN7AQ01118 1682 aa4.99□□□□□ -1.61
SDC2-208ENST00000523877 DOCK4Q8N1I0 1966 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 CRYM-AS1A6NIL9 109 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 KLLNB2CW77 178 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 SMIM22K7EJ46 135 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 PSPHP1O15172 72 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 BCE1O60756 84 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 TRBV12-3P01733 135 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 IGHV4-31P0DP07 118 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
SDC2-208ENST00000523877 SS18Q15532 418 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 ZNF627Q7L945 461 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms