RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 AMELYQ99218 206 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 CBLN4Q9NTU7 201 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 GSKIPQ9P0R6 139 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 LAMTOR3Q9UHA4 124 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 LAMTOR2Q9Y2Q5 125 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 CHCHD2Q9Y6H1 151 aaPredicted RBP0.89□□□□□ -2.27
SQLE-202ENST00000518604 WDR97A6NE52 1622 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 KDM6AO15550 1401 aaPredicted RBP0.89□□□□□ -2.27
SQLE-202ENST00000518604 RFX7Q2KHR2 1363 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 CST7O76096 145 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 TNFSF15O95150 251 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 OR10J4P0C629 311 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 RPL35P42766 123 aaKnown RBP0.88□□□□□ -2.27
SQLE-202ENST00000518604 VMA21Q3ZAQ7 101 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 MORN2Q502X0 79 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 FAM74A1Q5RGS3 127 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 EIF5AL1Q6IS14 154 aaKnown RBP0.88□□□□□ -2.27
SQLE-202ENST00000518604 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 TMEM14EPQ6UXP3 125 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 CLECL1Q8IZS7 167 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 TEX29Q8N6K0 151 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 NAT14Q8WUY8 206 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 PATE1Q8WXA2 126 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 MAFIPQ8WZ33 124 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 PSMF1Q92530 271 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 AIF1LQ9BQI0 150 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 CACYBPQ9HB71 228 aaKnown RBP0.88□□□□□ -2.27
SQLE-202ENST00000518604 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 LAMB4A4D0S4 1761 aa0.88□□□□□ -2.27
SQLE-202ENST00000518604 MYLKQ15746 1914 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 A2MP01023 1474 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 MED23Q9ULK4 1368 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 KIAA1549Q9HCM3 1950 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 A0A087WSZ3 146 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 TRBV27A0A0K0K1C4 114 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 ARL5CA6NH57 179 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 C9JAW5 83 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 RER1O15258 196 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 PFDN1O60925 122 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 SCTP09683 121 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 FABP2P12104 132 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 ZNF25P17030 456 aaPredicted RBP0.87□□□□□ -2.27
SQLE-202ENST00000518604 SDC2P34741 201 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 FOXA3P55318 350 aaPredicted RBP0.87□□□□□ -2.27
SQLE-202ENST00000518604 KLRD1Q13241 179 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 MORN4Q8NDC4 146 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 OR8J3Q8NGG0 315 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 OR5D16Q8NGK9 328 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 BORCS5Q969J3 196 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 HIGD1AQ9Y241 93 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 DLC1Q96QB1 1528 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 KIAA1107Q9UPP5 1409 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 USP54Q70EL1 1684 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 DSPPQ9NZW4 1301 aa0.87□□□□□ -2.27
SQLE-202ENST00000518604 TMEM189A5PLL7 270 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 M0QZK8 103 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 CCL16O15467 120 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 NDUFA2O43678 99 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 MT-ND4LP03901 98 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 HMGN1P05114 100 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 DSCR4P56555 118 aaPredicted RBP0.86□□□□□ -2.27
SQLE-202ENST00000518604 CKS1BP61024 79 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 SARNPP82979 210 aaKnown RBP0.86□□□□□ -2.27
SQLE-202ENST00000518604 MYL5Q02045 173 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 SMCO1Q147U7 214 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 SMIM21Q3B7S5 101 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 C2orf82Q6UX34 121 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 ZNF833PQ6ZTB9 187 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 LINC00305Q7Z4B0 112 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 LRRC18Q8N456 261 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 Q8TAT8 98 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 CHCHD1Q96BP2 118 aaKnown RBP0.86□□□□□ -2.27
SQLE-202ENST00000518604 KDM5CP41229 1560 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 MGAMO43451 1857 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 MUC4Q99102 2169 aa0.86□□□□□ -2.27
SQLE-202ENST00000518604 COL1A1P02452 1464 aaPredicted RBP0.86□□□□□ -2.27
SQLE-202ENST00000518604 CEP192Q8TEP8 1941 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 ZFC3H1O60293 1989 aaKnown RBP0.85□□□□□ -2.27
SQLE-202ENST00000518604 BORCS7-ASMTA0A0B4J1R7 106 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 TRAV13-1A0A0B4J241 112 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 TRBV6-4A0A1B0GX49 114 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 TCRBV4S1A1TA0A5B7 111 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 E7EUB6 86 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 SYNJ1O43426 1573 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 CRYGSP22914 178 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 RPL22P35268 128 aaKnown RBP0.85□□□□□ -2.27
SQLE-202ENST00000518604 RAB5CP51148 216 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 GTF2A1P52655 376 aaPredicted RBP0.85□□□□□ -2.27
SQLE-202ENST00000518604 DIAPH2-AS1Q14236 149 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 CCDC153Q494R4 210 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 OR8I2Q8N0Y5 310 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 LINC00269Q8N2A0 174 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 FAM216BQ8N7L0 139 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 OR2T35Q8NGX2 323 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 OR4K15Q8NH41 348 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 BRK1Q8WUW1 75 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 HYLS1Q96M11 299 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 PRELID3AQ96N28 172 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 ZNF714Q96N38 554 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 GGACTQ9BVM4 153 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms