RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 GGCTO75223 188 aaKnown RBP-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 DYNLT3P51808 116 aa-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 MIR22HGQ0VDD5 57 aa-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 EDDM3AQ14507 147 aa-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 CHCHD1Q96BP2 118 aaKnown RBP-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 IMUPQ9GZP8 106 aa-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 PRELID3BQ9Y3B1 194 aa-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 SETD2Q9BYW2 2564 aaPredicted RBP-0.95□□□□□ -2.56
RNU1-54P-201ENST00000517181 TRPM1Q7Z4N2 1603 aa-0.96□□□□□ -2.56
RNU1-54P-201ENST00000517181 ATP5G3P48201 142 aa-0.96□□□□□ -2.56
RNU1-54P-201ENST00000517181 TRIM4Q9C037 500 aa-0.96□□□□□ -2.56
RNU1-54P-201ENST00000517181 CEP164Q9UPV0 1460 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 PKDREJQ9NTG1 2253 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 hDV103S1A0JD37 113 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 FAM159BA6NKW6 160 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 PIAS1O75925 651 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 SERPINB9P50453 376 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 MYL6P60660 151 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 LRRC18Q8N456 261 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 ZHX1-C8orf76Q96EF9 292 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 MALSU1Q96EH3 234 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 ALMS1Q8TCU4 4167 aa-0.97□□□□□ -2.56
RNU1-54P-201ENST00000517181 NISCHQ9Y2I1 1504 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 A0A096LPI6 279 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 PRORSD1PA6NEY8 169 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 SULT1C4O75897 302 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 IFITM1P13164 125 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 EVI2AP22794 236 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 DEFB132Q7Z7B7 95 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 OTUD6BQ8N6M0 293 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 LINC00208Q96KT6 92 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 POPDC3Q9HBV1 291 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 DOCK4Q8N1I0 1966 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 SPTBN2O15020 2390 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 TGP01266 2768 aa-0.98□□□□□ -2.57
RNU1-54P-201ENST00000517181 NEBP20929 6669 aa-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 FRMPD1Q5SYB0 1578 aa-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 TPM3P06753 285 aa-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 ERP29P30040 261 aaKnown RBP-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 TMEM97Q5BJF2 176 aa-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 FAM213BQ8TBF2 198 aa-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 ASB4Q9Y574 426 aa-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 CCDC144AA2RUR9 1427 aa-0.99□□□□□ -2.57
RNU1-54P-201ENST00000517181 UBR2Q8IWV8 1755 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 TANC1Q9C0D5 1861 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 A0A096LNT2 108 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 CRHP06850 196 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 KLRD1Q13241 179 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 ZNF56Q15929 161 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 ZCCHC23Q6ZST2 131 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 LINC00269Q8N2A0 174 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 OR4K15Q8NH41 348 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 GNPDA2Q8TDQ7 276 aa-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 PARD6GQ9BYG4 376 aaPredicted RBP-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 CACYBPQ9HB71 228 aaKnown RBP-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 CNOT1A5YKK6 2376 aaKnown RBP-1□□□□□ -2.57
RNU1-54P-201ENST00000517181 CSMD3Q7Z407 3707 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 NBDYA0A0U1RRE5 68 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 MT4P47944 62 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 TPM4P67936 248 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 TRAPPC5Q8IUR0 188 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 C5orf17Q8NAS9 161 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 ARL5BQ96KC2 179 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 CST11Q9H112 138 aa-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 SPTBN1Q01082 2364 aaKnown RBP-1.01□□□□□ -2.57
RNU1-54P-201ENST00000517181 DUXBA0A1W2PPF3 345 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 FXYD1O00168 92 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 IFNA7P01567 189 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 TCRBP04435 133 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 IDO1P14902 403 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 LSM6P62312 80 aaKnown RBP-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 FXYD3Q14802 87 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 CSPG4Q6UVK1 2322 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 EPG5Q9HCE0 2579 aa-1.02□□□□□ -2.57
RNU1-54P-201ENST00000517181 CETN3O15182 167 aa-1.03□□□□□ -2.57
RNU1-54P-201ENST00000517181 CST8O60676 142 aa-1.03□□□□□ -2.57
RNU1-54P-201ENST00000517181 RPS3P23396 243 aaKnown RBP eCLIP-1.03□□□□□ -2.57
RNU1-54P-201ENST00000517181 C5orf56Q8N8D9 126 aa-1.03□□□□□ -2.57
RNU1-54P-201ENST00000517181 CCDC42Q96M95 316 aa-1.03□□□□□ -2.57
RNU1-54P-201ENST00000517181 NAT8BQ9UHF3 227 aa-1.03□□□□□ -2.57
RNU1-54P-201ENST00000517181 MED13LQ71F56 2210 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 ZFYVE9O95405 1425 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 ESPL1Q14674 2120 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 CYBAP13498 195 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 AESQ08117 197 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 ZNF714Q96N38 554 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 SPTA1P02549 2419 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 MXRA5Q9NR99 2828 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 BSNQ9UPA5 3926 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 F5P12259 2224 aa-1.04□□□□□ -2.58
RNU1-54P-201ENST00000517181 VWFP04275 2813 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 DSPPQ9NZW4 1301 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 CHD8Q9HCK8 2581 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 A0A1W2PRS3 328 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 RER1O15258 196 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 NFYBP25208 207 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 INSL3P51460 131 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 ARPP19P56211 112 aa-1.05□□□□□ -2.58
RNU1-54P-201ENST00000517181 COTL1Q14019 142 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms