RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	UBE2G2	P60604	165 aa		10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	GNG5	P63218	68 aa		10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	TRPT1	Q86TN4	253 aa	Known RBP	10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	ZNF738	Q8NE65	137 aa		10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	LRRC20	Q8TCA0	184 aa		10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	SFT2D1	Q8WV19	159 aa		10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	SLC50A1	Q9BRV3	221 aa		10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	RNF24	Q9Y225	148 aa		10.69	□□□□□ -0.7
MATR3-238	ENST00000512107	GGTLC3	B5MD39	225 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	C4BPB	P20851	252 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	SNRPD3	P62318	126 aa	Known RBP	10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	ERCC8	Q13216	396 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	PDE6H	Q13956	83 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	AMTN	Q6UX39	209 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	DPPA3	Q6W0C5	159 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	SBSPON	Q8IVN8	264 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	IQCF2	Q8IXL9	164 aa		10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	RPUSD4	Q96CM3	377 aa	Known RBP	10.68	□□□□□ -0.7
MATR3-238	ENST00000512107	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	PGP	A6NDG6	321 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107		A8MTW9	85 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	IGKV2D-40	P01614	121 aa	Predicted RBP	10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	H2AFB1	P0C5Y9	115 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	HLA-DRB4	P13762	266 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	FXYD7	P58549	80 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	TEX261	Q6UWH6	196 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	ZNF680	Q8NEM1	530 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	RETN	Q9HD89	108 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	HLA-DRB4	X5D2U9	266 aa		10.67	□□□□□ -0.7
MATR3-238	ENST00000512107	FAM74A7	A6NL05	159 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	CNN1	P51911	297 aa	Known RBP	10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	CMC4	P56277	68 aa	Predicted RBP	10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	PSG9	Q00887	426 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	KIR3DS1	Q14943	382 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	HAGH	Q16775	308 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	EIF5AL1	Q6IS14	154 aa	Known RBP	10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	FOXI2	Q6ZQN5	318 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	OR8A1	Q8NGG7	326 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	VGLL1	Q99990	258 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	SLC35B3	Q9H1N7	401 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	TUBA4B	Q9H853	241 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	OTOR	Q9NRC9	128 aa		10.66	□□□□□ -0.7
MATR3-238	ENST00000512107	TRAV1-1	A0A0B4J248	108 aa		10.65	□□□□□ -0.7
MATR3-238	ENST00000512107	ATP5G3	P48201	142 aa		10.65	□□□□□ -0.7
MATR3-238	ENST00000512107	RAB5C	P51148	216 aa		10.65	□□□□□ -0.7
MATR3-238	ENST00000512107	HIST1H1A	Q02539	215 aa	Predicted RBP	10.65	□□□□□ -0.7
MATR3-238	ENST00000512107	TMEM167B	Q9NRX6	74 aa		10.65	□□□□□ -0.7
MATR3-238	ENST00000512107	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	DIRC3	C9JPN6	131 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	TEX46	H3BTG2	121 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	PAGE4	O60829	102 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	CT45A10	P0DMU9	189 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	SUMO1	P63165	101 aa	Known RBP	10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	SAMD13	Q5VXD3	122 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	CCDC28A	Q8IWP9	274 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	OR4B1	Q8NGF8	309 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	MRPL53	Q96EL3	112 aa	Known RBP	10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	AGPAT4-IT1	Q9H0P7	198 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	RPH3AL	Q9UNE2	315 aa		10.64	□□□□□ -0.71
MATR3-238	ENST00000512107	NPIPB6	E9PJ23	425 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	STH	Q8IWL8	128 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	LYPD1	Q8N2G4	141 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	LYPD6B	Q8NI32	183 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	SGK494	Q96LW2	274 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	LINC00479	Q96M42	142 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	CLEC5A	Q9NY25	188 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	PRELID1	Q9Y255	219 aa		10.63	□□□□□ -0.71
MATR3-238	ENST00000512107	TRAV8-1	A0A0A6YYK1	113 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107		A0A1W2PRE2	83 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	CRX	O43186	299 aa	Predicted RBP	10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	RBMY1A1	P0DJD3	496 aa	Known RBP	10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	RBMY1C	P0DJD4	496 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	RBMY1F	Q15415	496 aa	Known RBP	10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	PRR9	Q5T870	116 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	EBLN2	Q6P2I7	272 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107		Q6ZQT7	251 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107		Q8TAT8	98 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	TVP23C	Q96ET8	276 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	B9D2	Q9BPU9	175 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	AAMDC	Q9H7C9	122 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	GNG13	Q9P2W3	67 aa		10.62	□□□□□ -0.71
MATR3-238	ENST00000512107	COL7A1	Q02388	2944 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107		M0R2Z0	102 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	IGLV2-11	P01706	119 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	SLC25A5	P05141	298 aa	Known RBP	10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	NMB	P08949	121 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	GOLT1A	Q6ZVE7	132 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	CSNK1G2-AS1	Q8NCQ2	148 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	FAM19A4	Q96LR4	140 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	RARRES2	Q99969	163 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	EPDR1	Q9UM22	224 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	TENM3	Q9P273	2699 aa		10.61	□□□□□ -0.71
MATR3-238	ENST00000512107	TRAV34	A0A0B4J273	112 aa		10.6	□□□□□ -0.71
MATR3-238	ENST00000512107	TCRA	P04437	139 aa		10.6	□□□□□ -0.71
MATR3-238	ENST00000512107	PRM2	P04554	102 aa		10.6	□□□□□ -0.71
MATR3-238	ENST00000512107	SPINK13	Q1W4C9	94 aa		10.6	□□□□□ -0.71
MATR3-238	ENST00000512107	C9orf47	Q6ZRZ4	202 aa		10.6	□□□□□ -0.71
MATR3-238	ENST00000512107	CLUHP3	Q96NS8	147 aa		10.6	□□□□□ -0.71
MATR3-238	ENST00000512107	CSTL1	Q9H114	145 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms