RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 C14orf177Q52M58 125 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 GDF5OSQ5U4N7 250 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 TMEM14EPQ6UXP3 125 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 PATE2Q6UY27 113 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 SIGLEC15Q6ZMC9 328 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 CYP2G1PQ6ZSU1 146 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 TMEM144Q7Z5S9 345 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 NRARPQ7Z6K4 114 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 KIR2DL5AQ8N109 375 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 OR10P1Q8NGE3 313 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 KIR2DL5BQ8NHK3 375 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 OCC1Q8TAD7 63 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 C2orf50Q96LR7 162 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 C17orf77Q96MU5 243 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 RARRES2Q99969 163 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 SCRT1Q9BWW7 348 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 NRN1Q9NPD7 142 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 PTTG2Q9NZH5 202 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 XCL2Q9UBD3 114 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 LYSTQ99698 3801 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 TRAV2A0A0B4J234 112 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 IGSF23A1L1A6 192 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 INMT-MINDY4F8WBC2 141 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 H3BMM0 161 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 H3BTX0 84 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 GOSR2O14653 212 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 HYPMO75409 117 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 DEDDO75618 318 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 PRM2P04554 102 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 OR5G3P0C626 314 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 LINC00869P0C866 280 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 RBMY1A1P0DJD3 496 aaKnown RBP3.27□□□□□ -1.89
NUP54-206ENST00000508465 RBMY1CP0DJD4 496 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 SPP1P10451 314 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 C4BPBP20851 252 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 HLA-DMBP28068 263 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 CAMLGP49069 296 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 CAV2P51636 162 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 TAS2R30P59541 319 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 SNRPD3P62318 126 aaKnown RBP3.27□□□□□ -1.89
NUP54-206ENST00000508465 RBMY1FQ15415 496 aaKnown RBP3.27□□□□□ -1.89
NUP54-206ENST00000508465 LBHQ53QV2 105 aaPredicted RBP3.27□□□□□ -1.89
NUP54-206ENST00000508465 C1orf194Q5T5A4 169 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 TRPT1Q86TN4 253 aaKnown RBP3.27□□□□□ -1.89
NUP54-206ENST00000508465 RNF182Q8N6D2 247 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 BPIFCQ8NFQ6 507 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 OR4B1Q8NGF8 309 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 ENKURQ8TC29 256 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 TMEM147Q9BVK8 224 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 C11orf1Q9H5F2 150 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 NPVFQ9HCQ7 196 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 HIGD1AQ9Y241 93 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 TP53TG1Q9Y2A0 90 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 SACSQ9NZJ4 4579 aa3.27□□□□□ -1.89
NUP54-206ENST00000508465 PLECQ15149 4684 aaKnown RBP3.26□□□□□ -1.89
NUP54-206ENST00000508465 IGHV3OR16-12A0A075B7B8 117 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 TRAV8-2A0A0B4J237 113 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 TRAV5A0A0B4J249 113 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 LCE6AA0A183 80 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 SOCS3O14543 225 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 AGPAT2O15120 278 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 TSC22D2O75157 780 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 ID1P41134 155 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 GALR1P47211 349 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 EMP1P54849 157 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 DLK1P80370 383 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 IL15RAQ13261 267 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 LRRC37A5PQ49AS3 106 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 FAM78BQ5VT40 261 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 LINC00299Q6ZSB3 139 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 ZNF767PQ75MW2 155 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 NEXN-AS1Q8NBZ9 246 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 CSNK1G2-AS1Q8NCQ2 148 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 GATAD1Q8WUU5 269 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 MGST2Q99735 147 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 SLC25A39Q9BZJ4 359 aaPredicted RBP3.26□□□□□ -1.89
NUP54-206ENST00000508465 SLC35B3Q9H1N7 401 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 GPN1Q9HCN4 374 aaPredicted RBP3.26□□□□□ -1.89
NUP54-206ENST00000508465 BATF3Q9NR55 127 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 OR5AC2Q9NZP5 309 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 RYR2Q92736 4967 aa3.26□□□□□ -1.89
NUP54-206ENST00000508465 HYDINQ4G0P3 5121 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 A0A0J9YX75 114 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 ZNF705FA8MVS1 300 aaPredicted RBP3.25□□□□□ -1.89
NUP54-206ENST00000508465 ISLRO14498 428 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 SSNA1O43805 119 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 COX7A2P2O60397 106 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 CFDP00746 253 aaPredicted RBP3.25□□□□□ -1.89
NUP54-206ENST00000508465 RLN2P04090 185 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 HLA-DRB4P13762 266 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 PVALBP20472 110 aaPredicted RBP3.25□□□□□ -1.89
NUP54-206ENST00000508465 FGF7P21781 194 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 NUP62P37198 522 aaPredicted RBP3.25□□□□□ -1.89
NUP54-206ENST00000508465 PSMB3P49720 205 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 H2BFSP57053 126 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 SELENOTP62341 195 aa3.25□□□□□ -1.89
NUP54-206ENST00000508465 PSG9Q00887 426 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms