RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 NDUFC2O95298 119 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 TRGC2P03986 189 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 RPL37AP61513 92 aaKnown RBP-0.07□□□□□ -2.42
SMC4-227ENST00000497984 GNG5P63218 68 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 REEP5Q00765 189 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 SPINK6Q6UWN8 80 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 RMND5BQ96G75 393 aaPredicted RBP-0.07□□□□□ -2.42
SMC4-227ENST00000497984 PHB2Q99623 299 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 PAIP2Q9BPZ3 127 aaKnown RBP-0.07□□□□□ -2.42
SMC4-227ENST00000497984 OR2J1Q9GZK6 312 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 FASNP49327 2511 aaKnown RBP-0.07□□□□□ -2.42
SMC4-227ENST00000497984 ANKRD11Q6UB99 2663 aaPredicted RBP-0.07□□□□□ -2.42
SMC4-227ENST00000497984 TGP01266 2768 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 ITPR1Q14643 2758 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 SRRM2Q9UQ35 2752 aaKnown RBP-0.07□□□□□ -2.42
SMC4-227ENST00000497984 ACANP16112 2415 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 MGAMO43451 1857 aa-0.07□□□□□ -2.42
SMC4-227ENST00000497984 CITO14578 2027 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 SETXQ7Z333 2677 aaKnown RBP-0.08□□□□□ -2.42
SMC4-227ENST00000497984 SNRNP200O75643 2136 aaKnown RBP-0.08□□□□□ -2.42
SMC4-227ENST00000497984 ABCA12Q86UK0 2595 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 PLXND1Q9Y4D7 1925 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 CHD9Q3L8U1 2897 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 A0A096LPI6 279 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 G3V2T6 193 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 HSD11B1P28845 292 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 CAPZBP47756 277 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 FXYD6P3P58550 94 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 QRFPP83859 136 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 LINC00299Q6ZSB3 139 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 ZCCHC23Q6ZST2 131 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 MAP1LC3BQ9GZQ8 125 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 PYCARDQ9ULZ3 195 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 BOKQ9UMX3 212 aaPredicted RBP-0.08□□□□□ -2.42
SMC4-227ENST00000497984 PIEZO1Q92508 2521 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 FRMPD1Q5SYB0 1578 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 SCN3AQ9NY46 2000 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 HERC2O95714 4834 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 KMT2AQ03164 3969 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 ZNF292O60281 2723 aa-0.08□□□□□ -2.42
SMC4-227ENST00000497984 COL24A1Q17RW2 1714 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 USP9XQ93008 2570 aaPredicted RBP-0.09□□□□□ -2.42
SMC4-227ENST00000497984 ABCA2Q9BZC7 2435 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 TRAV5A0A0B4J249 113 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 A0A0J9YY99 117 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 HIST1H2BKO60814 126 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 LY6G6CO95867 125 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 IFNA4P05014 189 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 HIST1H2BJP06899 126 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 PDE6GP18545 87 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 SNCBQ16143 134 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 PRR15Q8IV56 129 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 IFT20Q8IY31 132 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 CASP8AP2Q9UKL3 1982 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 MXRA5Q9NR99 2828 aa-0.09□□□□□ -2.42
SMC4-227ENST00000497984 NBEAL1Q6ZS30 2694 aa-0.1□□□□□ -2.42
SMC4-227ENST00000497984 TET1Q8NFU7 2136 aa-0.1□□□□□ -2.42
SMC4-227ENST00000497984 SCN10AQ9Y5Y9 1956 aa-0.1□□□□□ -2.42
SMC4-227ENST00000497984 ATRQ13535 2644 aa-0.1□□□□□ -2.42
SMC4-227ENST00000497984 TNXBP22105 4242 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 RIIAD1A6NNX1 92 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 H7C1C5 153 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 AIPO00170 330 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 LYRM1O43325 122 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 IFNA14P01570 189 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 OGNP20774 298 aaKnown RBP-0.1□□□□□ -2.43
SMC4-227ENST00000497984 PHBP35232 272 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 LCN6P62502 163 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 DIAPH2-AS1Q14236 149 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 ASB16-AS1Q495Z4 193 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 SCGB2B2Q4G0G5 96 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 DHRS4L2Q6PKH6 230 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 PHF5AQ7RTV0 110 aaKnown RBP-0.1□□□□□ -2.43
SMC4-227ENST00000497984 LINC00269Q8N2A0 174 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 FAM216BQ8N7L0 139 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 CST11Q9H112 138 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 SS18L2Q9UHA2 77 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 NISCHQ9Y2I1 1504 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 LRP2P98164 4655 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 HRNRQ86YZ3 2850 aaPredicted RBP-0.1□□□□□ -2.43
SMC4-227ENST00000497984 BIRC6Q9NR09 4857 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 FAT1Q14517 4588 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 TRANK1O15050 2925 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 ITPR3Q14573 2671 aa-0.1□□□□□ -2.43
SMC4-227ENST00000497984 FLNCQ14315 2725 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 USP9YO00507 2555 aaPredicted RBP-0.11□□□□□ -2.43
SMC4-227ENST00000497984 MYO18BQ8IUG5 2567 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 TRPM1Q7Z4N2 1603 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 TMEM210A6NLX4 147 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 PIAS1O75925 651 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 ATG12O94817 140 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 HBBP68871 147 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 VMA21Q3ZAQ7 101 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 AKR1C8PQ5T2L2 129 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 C1orf140Q5VVS0 124 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 PXT1Q8NFP0 134 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 SH3BGRL3Q9H299 93 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 LYRM2Q9NU23 88 aaPredicted RBP-0.11□□□□□ -2.43
SMC4-227ENST00000497984 MGAM2Q2M2H8 2515 aa-0.11□□□□□ -2.43
SMC4-227ENST00000497984 MUC4Q99102 2169 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms