RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 K7EQM0 130 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF324O75467 553 aaPredicted RBP11.59□□□□□ -0.55
CHTOP-206ENST00000495554 COL8A1P27658 744 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 GTSF1Q8WW33 167 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 AJUBAQ96IF1 538 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 PEF1Q9UBV8 284 aaKnown RBP11.59□□□□□ -0.55
CHTOP-206ENST00000495554 FLNCQ14315 2725 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 BATFQ16520 125 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 TEX43Q6ZNM6 134 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 CIARTQ8N365 385 aaPredicted RBP11.59□□□□□ -0.55
CHTOP-206ENST00000495554 OR4B1Q8NGF8 309 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF414Q96IQ9 312 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
CHTOP-206ENST00000495554 VPS13CQ709C8 3753 aa11.58□□□□□ -0.55
CHTOP-206ENST00000495554 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 KLF5Q13887 457 aaPredicted RBP11.58□□□□□ -0.56
CHTOP-206ENST00000495554 PDE6HQ13956 83 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
CHTOP-206ENST00000495554 FBLL1A6NHQ2 334 aaKnown RBP11.58□□□□□ -0.56
CHTOP-206ENST00000495554 IGHV4-39P01824 125 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 PMCHP20382 165 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 Q8N9W7 124 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
CHTOP-206ENST00000495554 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 VCX2Q9H322 139 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 FBXL7Q9UJT9 491 aa11.58□□□□□ -0.56
CHTOP-206ENST00000495554 EGR2P11161 476 aaPredicted RBP11.57□□□□□ -0.56
CHTOP-206ENST00000495554 VN1R17PQ8TDU5 208 aa11.57□□□□□ -0.56
CHTOP-206ENST00000495554 TGFAP01135 160 aa11.57□□□□□ -0.56
CHTOP-206ENST00000495554 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
CHTOP-206ENST00000495554 LOC102724200A0A096LPH7 203 aaPredicted RBP11.56□□□□□ -0.56
CHTOP-206ENST00000495554 KRTDAPP60985 99 aa11.56□□□□□ -0.56
CHTOP-206ENST00000495554 BCL6BQ8N143 479 aaPredicted RBP11.56□□□□□ -0.56
CHTOP-206ENST00000495554 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
CHTOP-206ENST00000495554 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
CHTOP-206ENST00000495554 USP9XQ93008 2570 aaPredicted RBP11.56□□□□□ -0.56
CHTOP-206ENST00000495554 CACNA1BQ00975 2339 aa11.56□□□□□ -0.56
CHTOP-206ENST00000495554 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
CHTOP-206ENST00000495554 PSG8Q9UQ74 426 aa11.56□□□□□ -0.56
CHTOP-206ENST00000495554 OR2T8A6NH00 312 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 SIVA1O15304 175 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 CTSGP08311 255 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 SAA4P35542 130 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
CHTOP-206ENST00000495554 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 C20orf144Q9BQM9 153 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 RNF114Q9Y508 228 aa11.55□□□□□ -0.56
CHTOP-206ENST00000495554 IGHV3-23P01764 117 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 RPL7P18124 248 aaKnown RBP11.54□□□□□ -0.56
CHTOP-206ENST00000495554 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 NIT1Q86X76 327 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 FAM19A2Q8N3H0 131 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 VAMP8Q9BV40 100 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 ZNF785A8K8V0 405 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 M0R3E3 92 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 HSBP1O75506 76 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 ARL3P36405 182 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 PSG9Q00887 426 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
CHTOP-206ENST00000495554 NTF3P20783 257 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 CSN1S1P47710 185 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 FAM110DQ8TAY7 271 aaPredicted RBP11.53□□□□□ -0.56
CHTOP-206ENST00000495554 BORCS7Q96B45 105 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 HAX1O00165 279 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 Q71RC1 249 aaPredicted RBP11.53□□□□□ -0.56
CHTOP-206ENST00000495554 Q8N976 141 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 MIEN1Q9BRT3 115 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 RABAC1Q9UI14 185 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 SPG11Q96JI7 2443 aa11.53□□□□□ -0.56
CHTOP-206ENST00000495554 USP24Q9UPU5 2620 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 ABCA2Q9BZC7 2435 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 KLK9Q2XQG4 91 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 FAM162BQ5T6X4 162 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 UNQ5815/PRO19632Q6UWF5 114 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 ZNF738Q8NE65 137 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 KLK9Q9UKQ9 250 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.56
CHTOP-206ENST00000495554 CHEK1O14757 476 aa11.52□□□□□ -0.57
CHTOP-206ENST00000495554 C3orf79P0CE67 100 aa11.52□□□□□ -0.57
CHTOP-206ENST00000495554 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
CHTOP-206ENST00000495554 NPFFO15130 113 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 TSPAN13O95857 204 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 APOHP02749 345 aaPredicted RBP11.51□□□□□ -0.57
CHTOP-206ENST00000495554 CT45A10P0DMU9 189 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 C15orf32Q32M92 178 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 SH2D7A6NKC9 451 aaPredicted RBP11.51□□□□□ -0.57
CHTOP-206ENST00000495554 ATP6V0E1O15342 81 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 CKS1BP61024 79 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 ECSCRQ19T08 205 aa11.51□□□□□ -0.57
CHTOP-206ENST00000495554 RNASEKQ6P5S7 137 aaKnown RBP11.51□□□□□ -0.57
CHTOP-206ENST00000495554 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
CHTOP-206ENST00000495554 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms