RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 OR4B1Q8NGF8 309 aa9.79□□□□□ -0.84
HDAC1-208ENST00000482310 RPUSD4Q96CM3 377 aaKnown RBP9.79□□□□□ -0.84
HDAC1-208ENST00000482310 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
HDAC1-208ENST00000482310 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
HDAC1-208ENST00000482310 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
HDAC1-208ENST00000482310 RAB5CP51148 216 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 FXYD7P58549 80 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 GNG5P63218 68 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 PDE6HQ13956 83 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 EBLN2Q6P2I7 272 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 ASCL2Q99929 193 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 TMEM167BQ9NRX6 74 aa9.78□□□□□ -0.84
HDAC1-208ENST00000482310 YTHDF2Q9Y5A9 579 aaKnown RBP9.78□□□□□ -0.84
HDAC1-208ENST00000482310 IGKV2-40A0A087WW87 121 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-208ENST00000482310 PGPA6NDG6 321 aa9.77□□□□□ -0.85
HDAC1-208ENST00000482310 ZNF253O75346 499 aa9.77□□□□□ -0.85
HDAC1-208ENST00000482310 IGKV2D-40P01614 121 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-208ENST00000482310 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.85
HDAC1-208ENST00000482310 FOXI2Q6ZQN5 318 aa9.77□□□□□ -0.85
HDAC1-208ENST00000482310 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
HDAC1-208ENST00000482310 FAM110AQ9BQ89 295 aa9.77□□□□□ -0.85
HDAC1-208ENST00000482310 SAV1Q9H4B6 383 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-208ENST00000482310 LOC102724200A0A096LPH7 203 aaPredicted RBP9.76□□□□□ -0.85
HDAC1-208ENST00000482310 CCL20P78556 96 aa9.76□□□□□ -0.85
HDAC1-208ENST00000482310 ERCC8Q13216 396 aa9.76□□□□□ -0.85
HDAC1-208ENST00000482310 CST9LP1Q5W188 147 aa9.76□□□□□ -0.85
HDAC1-208ENST00000482310 TEX261Q6UWH6 196 aa9.76□□□□□ -0.85
HDAC1-208ENST00000482310 CMTM2Q8TAZ6 248 aa9.76□□□□□ -0.85
HDAC1-208ENST00000482310 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
HDAC1-208ENST00000482310 GNG13Q9P2W3 67 aa9.76□□□□□ -0.85
HDAC1-208ENST00000482310 A0A0J9YX75 114 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 GGTLC3B5MD39 225 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 H3BMM0 161 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 PAGE4O60829 102 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 HLA-DRB4P13762 266 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 CSN1S1P47710 185 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 CNN1P51911 297 aaKnown RBP9.75□□□□□ -0.85
HDAC1-208ENST00000482310 SUMO1P63165 101 aaKnown RBP9.75□□□□□ -0.85
HDAC1-208ENST00000482310 TRPT1Q86TN4 253 aaKnown RBP9.75□□□□□ -0.85
HDAC1-208ENST00000482310 ZNF680Q8NEM1 530 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 OR8A1Q8NGG7 326 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 OR10J6PQ8NGY7 276 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 HLA-DRB4X5D2U9 266 aa9.75□□□□□ -0.85
HDAC1-208ENST00000482310 FAM74A7A6NL05 159 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 TEX46H3BTG2 121 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 J3KRW8 73 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 IFNA7P01567 189 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 HBE1P02100 147 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 ATP5G3P48201 142 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 SUN5Q8TC36 379 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 SLC35B3Q9H1N7 401 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 PPP1R14DQ9NXH3 145 aa9.74□□□□□ -0.85
HDAC1-208ENST00000482310 CA1P00915 261 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-208ENST00000482310 BLOC1S1P78537 153 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 HAGHQ16775 308 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 GOLT1AQ6ZVE7 132 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 LYPD1Q8N2G4 141 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 Q8TAT8 98 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 MRPL53Q96EL3 112 aaKnown RBP9.73□□□□□ -0.85
HDAC1-208ENST00000482310 SGK494Q96LW2 274 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 VGLL1Q99990 258 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 RETNQ9HD89 108 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 CLEC5AQ9NY25 188 aa9.73□□□□□ -0.85
HDAC1-208ENST00000482310 A0A1W2PRE2 83 aa9.72□□□□□ -0.85
HDAC1-208ENST00000482310 DIRC3C9JPN6 131 aa9.72□□□□□ -0.85
HDAC1-208ENST00000482310 M0R2Z0 102 aa9.72□□□□□ -0.85
HDAC1-208ENST00000482310 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
HDAC1-208ENST00000482310 APOC4P55056 127 aa9.72□□□□□ -0.85
HDAC1-208ENST00000482310 SPINK13Q1W4C9 94 aa9.72□□□□□ -0.85
HDAC1-208ENST00000482310 LCE2DQ5TA82 110 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-208ENST00000482310 SBSPONQ8IVN8 264 aa9.72□□□□□ -0.85
HDAC1-208ENST00000482310 NBEAL2Q6ZNJ1 2754 aa9.72□□□□□ -0.85
HDAC1-208ENST00000482310 COL7A1Q02388 2944 aa9.71□□□□□ -0.85
HDAC1-208ENST00000482310 TRAV8-1A0A0A6YYK1 113 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 TRAV1-1A0A0B4J248 108 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 A8MZ25 164 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 DEFB135Q30KP9 77 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 C5orf17Q8NAS9 161 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 RXFP4Q8TDU9 374 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 CSTL1Q9H114 145 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 MANBALQ9NQG1 85 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 XCL2Q9UBD3 114 aa9.71□□□□□ -0.86
HDAC1-208ENST00000482310 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 TRAV34A0A0B4J273 112 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 C11orf94C9JXX5 98 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 NPIPB6E9PJ23 425 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 IFNA1P01562 189 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 TCRAP04437 139 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 CT45A10P0DMU9 189 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 PPT1P50897 306 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 TMEM78Q5T7P6 136 aa9.7□□□□□ -0.86
HDAC1-208ENST00000482310 LINC00322Q6ZN03 302 aaPredicted RBP9.7□□□□□ -0.86
HDAC1-208ENST00000482310 SCO2A0A1W2PP80 73 aa9.69□□□□□ -0.86
HDAC1-208ENST00000482310 PEX7O00628 323 aa9.69□□□□□ -0.86
HDAC1-208ENST00000482310 IFITM2Q01629 132 aa9.69□□□□□ -0.86
HDAC1-208ENST00000482310 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
HDAC1-208ENST00000482310 RARRES2Q99969 163 aa9.69□□□□□ -0.86
HDAC1-208ENST00000482310 AGPAT4-IT1Q9H0P7 198 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms