RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
GPC1-207ENST00000466624 KIR2DL5BQ8NHK3 375 aa11.8□□□□□ -0.52
GPC1-207ENST00000466624 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
GPC1-207ENST00000466624 B9D2Q9BPU9 175 aa11.8□□□□□ -0.52
GPC1-207ENST00000466624 Q9H3A6 140 aa11.8□□□□□ -0.52
GPC1-207ENST00000466624 PRKDCP78527 4128 aaKnown RBP11.79□□□□□ -0.52
GPC1-207ENST00000466624 A8MTW9 85 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 RANP62826 216 aaKnown RBP11.79□□□□□ -0.52
GPC1-207ENST00000466624 ICAM4Q14773 271 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 FAM74A1Q5RGS3 127 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 GDF5OSQ5U4N7 250 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 ALKAL2Q6UX46 152 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 ARL6IP6Q8N6S5 226 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 OTORQ9NRC9 128 aa11.79□□□□□ -0.52
GPC1-207ENST00000466624 TRAV1-1A0A0B4J248 108 aa11.78□□□□□ -0.52
GPC1-207ENST00000466624 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
GPC1-207ENST00000466624 DUSP14O95147 198 aaKnown RBP11.78□□□□□ -0.52
GPC1-207ENST00000466624 APOC4P55056 127 aa11.78□□□□□ -0.52
GPC1-207ENST00000466624 FGF8P55075 233 aaPredicted RBP11.78□□□□□ -0.52
GPC1-207ENST00000466624 OR8A1Q8NGG7 326 aa11.78□□□□□ -0.52
GPC1-207ENST00000466624 RXFP4Q8TDU9 374 aa11.78□□□□□ -0.52
GPC1-207ENST00000466624 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
GPC1-207ENST00000466624 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
GPC1-207ENST00000466624 ZNF705FA8MVS1 300 aaPredicted RBP11.77□□□□□ -0.53
GPC1-207ENST00000466624 F6UB75 175 aa11.77□□□□□ -0.53
GPC1-207ENST00000466624 TEX46H3BTG2 121 aa11.77□□□□□ -0.53
GPC1-207ENST00000466624 M0R3E3 92 aa11.77□□□□□ -0.53
GPC1-207ENST00000466624 DEFB1P60022 68 aa11.77□□□□□ -0.53
GPC1-207ENST00000466624 MORN3Q6PF18 240 aaPredicted RBP11.77□□□□□ -0.53
GPC1-207ENST00000466624 IQCF2Q8IXL9 164 aa11.77□□□□□ -0.53
GPC1-207ENST00000466624 TMPRSS5Q9H3S3 457 aa11.77□□□□□ -0.53
GPC1-207ENST00000466624 DNAH9Q9NYC9 4486 aa11.76□□□□□ -0.53
GPC1-207ENST00000466624 UBE2CO00762 179 aa11.76□□□□□ -0.53
GPC1-207ENST00000466624 HBE1P02100 147 aa11.76□□□□□ -0.53
GPC1-207ENST00000466624 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
GPC1-207ENST00000466624 CSN1S1P47710 185 aa11.76□□□□□ -0.53
GPC1-207ENST00000466624 PPT1P50897 306 aa11.76□□□□□ -0.53
GPC1-207ENST00000466624 NUTF2P61970 127 aaKnown RBP11.76□□□□□ -0.53
GPC1-207ENST00000466624 HAGHQ16775 308 aa11.76□□□□□ -0.53
GPC1-207ENST00000466624 NKX6-2Q9C056 277 aaPredicted RBP11.76□□□□□ -0.53
GPC1-207ENST00000466624 CSTL1Q9H114 145 aa11.76□□□□□ -0.53
GPC1-207ENST00000466624 PGPA6NDG6 321 aa11.75□□□□□ -0.53
GPC1-207ENST00000466624 ZNF705EA8MWA4 302 aaPredicted RBP11.75□□□□□ -0.53
GPC1-207ENST00000466624 PRAC2D3DTV9 90 aa11.75□□□□□ -0.53
GPC1-207ENST00000466624 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
GPC1-207ENST00000466624 BLOC1S1P78537 153 aa11.75□□□□□ -0.53
GPC1-207ENST00000466624 TEX261Q6UWH6 196 aa11.75□□□□□ -0.53
GPC1-207ENST00000466624 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
GPC1-207ENST00000466624 OR10J6PQ8NGY7 276 aa11.75□□□□□ -0.53
GPC1-207ENST00000466624 RBAKDNA6NC62 111 aa11.74□□□□□ -0.53
GPC1-207ENST00000466624 FAM74A7A6NL05 159 aa11.74□□□□□ -0.53
GPC1-207ENST00000466624 NPIPB6E9PJ23 425 aa11.74□□□□□ -0.53
GPC1-207ENST00000466624 SLC25A5P05141 298 aaKnown RBP11.74□□□□□ -0.53
GPC1-207ENST00000466624 HIST1H1AQ02539 215 aaPredicted RBP11.74□□□□□ -0.53
GPC1-207ENST00000466624 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
GPC1-207ENST00000466624 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
GPC1-207ENST00000466624 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
GPC1-207ENST00000466624 SERTM2A0A1B0GWG4 89 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 GGTLC3B5MD39 225 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 DIRC3C9JPN6 131 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 ZNF705DP0CH99 300 aaPredicted RBP11.73□□□□□ -0.53
GPC1-207ENST00000466624 ZNF705BP0CI00 300 aaPredicted RBP11.73□□□□□ -0.53
GPC1-207ENST00000466624 PMS2P11Q13670 270 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 Q6ZWC4 215 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 ODF3Q96PU9 254 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 TM2D3Q9BRN9 247 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 TCEAL7Q9BRU2 100 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 C1QTNF4Q9BXJ3 329 aa11.73□□□□□ -0.53
GPC1-207ENST00000466624 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
GPC1-207ENST00000466624 IFNA7P01567 189 aa11.72□□□□□ -0.53
GPC1-207ENST00000466624 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
GPC1-207ENST00000466624 SUMO1P63165 101 aaKnown RBP11.72□□□□□ -0.53
GPC1-207ENST00000466624 C9orf47Q6ZRZ4 202 aa11.72□□□□□ -0.53
GPC1-207ENST00000466624 LYPD6BQ8NI32 183 aa11.72□□□□□ -0.53
GPC1-207ENST00000466624 LINC00477Q96M19 166 aa11.72□□□□□ -0.53
GPC1-207ENST00000466624 MANBALQ9NQG1 85 aa11.72□□□□□ -0.53
GPC1-207ENST00000466624 A0A1B0GV50 99 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 CA1P00915 261 aaPredicted RBP11.71□□□□□ -0.53
GPC1-207ENST00000466624 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 AMBPP02760 352 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.53
GPC1-207ENST00000466624 UBE2G2P60604 165 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 ZNF680Q8NEM1 530 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 SPATA25Q9BR10 227 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 EPDR1Q9UM22 224 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 TP53TG1Q9Y2A0 90 aa11.71□□□□□ -0.53
GPC1-207ENST00000466624 IGKV2-40A0A087WW87 121 aaPredicted RBP11.7□□□□□ -0.54
GPC1-207ENST00000466624 PAGE4O60829 102 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 IGKV2D-40P01614 121 aaPredicted RBP11.7□□□□□ -0.54
GPC1-207ENST00000466624 TCRAP04437 139 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 CCL20P78556 96 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 CCDC28AQ8IWP9 274 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 ASCL2Q99929 193 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 TXNDC17Q9BRA2 123 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 AGPAT4-IT1Q9H0P7 198 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
GPC1-207ENST00000466624 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms