RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 F6UB75 175 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 HAGHQ16775 308 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 ACTL10Q5JWF8 245 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 SBSPONQ8IVN8 264 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 STHQ8IWL8 128 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 EXOC3-AS1Q8N2X6 119 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 MAP1LC3BQ9GZQ8 125 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 AAMDCQ9H7C9 122 aa8.65□□□□□ -1.02
TRAPPC12-212ENST00000457845 TRAV1-1A0A0B4J248 108 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 ZNF705FA8MVS1 300 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 M0R3E3 92 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 RANP62826 216 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 ICAM4Q14773 271 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 EBLN2Q6P2I7 272 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 ZNF738Q8NE65 137 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 FAM213BQ8TBF2 198 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 Q9H3A6 140 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 TMPRSS5Q9H3S3 457 aa8.64□□□□□ -1.03
TRAPPC12-212ENST00000457845 A0A1W2PRE2 83 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 PRAC2D3DTV9 90 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 UBE2CO00762 179 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 DUSP14O95147 198 aaKnown RBP8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 GIG44P09565 113 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 H2AFB1P0C5Y9 115 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 APOC4P55056 127 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 FGF8P55075 233 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 SFT2D1Q8WV19 159 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 TM2D3Q9BRN9 247 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 CSTL1Q9H114 145 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 OTORQ9NRC9 128 aa8.63□□□□□ -1.03
TRAPPC12-212ENST00000457845 PGPA6NDG6 321 aa8.62□□□□□ -1.03
TRAPPC12-212ENST00000457845 CNN1P51911 297 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-212ENST00000457845 FAM74A1Q5RGS3 127 aa8.62□□□□□ -1.03
TRAPPC12-212ENST00000457845 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
TRAPPC12-212ENST00000457845 Q6ZWC4 215 aa8.62□□□□□ -1.03
TRAPPC12-212ENST00000457845 RXFP4Q8TDU9 374 aa8.62□□□□□ -1.03
TRAPPC12-212ENST00000457845 ARL2-SNX15V9GYD0 113 aa8.62□□□□□ -1.03
TRAPPC12-212ENST00000457845 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 RBAKDNA6NC62 111 aa8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 NPIPB6E9PJ23 425 aa8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 SLC25A5P05141 298 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 ZNF705DP0CH99 300 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 ZNF705BP0CI00 300 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 PMS2P11Q13670 270 aa8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 C9orf47Q6ZRZ4 202 aa8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 OR4B1Q8NGF8 309 aa8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 ASCL2Q99929 193 aa8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-212ENST00000457845 NBEAL2Q6ZNJ1 2754 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 FAM74A7A6NL05 159 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 DIRC3C9JPN6 131 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 HBE1P02100 147 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 CSN1S1P47710 185 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 NUTF2P61970 127 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 HIST1H1AQ02539 215 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 CCDC28AQ8IWP9 274 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 OR10J6PQ8NGY7 276 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 LYPD6BQ8NI32 183 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 LINC00477Q96M19 166 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 ODF3Q96PU9 254 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 PPP1R14DQ9NXH3 145 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 YTHDF2Q9Y5A9 579 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 TENM3Q9P273 2699 aa8.6□□□□□ -1.03
TRAPPC12-212ENST00000457845 ZNF705EA8MWA4 302 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 IGKV3-20P01619 116 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 PPT1P50897 306 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 BLOC1S1P78537 153 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 TEX261Q6UWH6 196 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 IQCF2Q8IXL9 164 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 C5orf17Q8NAS9 161 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 RNF183Q96D59 192 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 FAM19A4Q96LR4 140 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 SPATA25Q9BR10 227 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 C1QTNF4Q9BXJ3 329 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 AGPAT4-IT1Q9H0P7 198 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
TRAPPC12-212ENST00000457845 IGKV2-40A0A087WW87 121 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 TEX46H3BTG2 121 aa8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 CA1P00915 261 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 IGKV2D-40P01614 121 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 TCRAP04437 139 aa8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 CT45A10P0DMU9 189 aa8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 CCL20P78556 96 aa8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 ZNF680Q8NEM1 530 aa8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 CMTM2Q8TAZ6 248 aa8.58□□□□□ -1.04
TRAPPC12-212ENST00000457845 VGLL1Q99990 258 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms