RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 RPL27AP46776 148 aaKnown RBP16.02■□□□□ 0.16
SHOX2-203ENST00000441443 MRPL51Q4U2R6 128 aaKnown RBP16.02■□□□□ 0.16
SHOX2-203ENST00000441443 PRB3Q04118 309 aaPredicted RBP16.02■□□□□ 0.15
SHOX2-203ENST00000441443 A0A1B0GW15 77 aa16.01■□□□□ 0.15
SHOX2-203ENST00000441443 ZNF493Q6ZR52 646 aa16.01■□□□□ 0.15
SHOX2-203ENST00000441443 SPTAN1Q13813 2472 aaKnown RBP16.01■□□□□ 0.15
SHOX2-203ENST00000441443 ZZEF1O43149 2961 aa16.01■□□□□ 0.15
SHOX2-203ENST00000441443 NPYP01303 97 aa16.01■□□□□ 0.15
SHOX2-203ENST00000441443 AKAP6Q13023 2319 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 PRSS33Q8NF86 280 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 BSNQ9UPA5 3926 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 TRBV19A0A075B6N1 114 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 DLX1P56177 255 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 TMEM75Q8N9X5 138 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 CHD8Q9HCK8 2581 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 NCOR2Q9Y618 2525 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 LRBAP50851 2863 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 NGBQ9NPG2 151 aa16■□□□□ 0.15
SHOX2-203ENST00000441443 TSSC4Q9Y5U2 329 aaPredicted RBP16■□□□□ 0.15
SHOX2-203ENST00000441443 CD40P25942 277 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 CKS2P33552 79 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 PAX8Q06710 450 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 SIGMAR1Q99720 223 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 TMEM14CQ9P0S9 112 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 U3KQK5 164 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 IGFL3Q6UXB1 125 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 TNFRSF14Q92956 283 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 RASL11BQ9BPW5 248 aa15.99■□□□□ 0.15
SHOX2-203ENST00000441443 ANKHD1Q8IWZ3 2542 aaKnown RBP15.99■□□□□ 0.15
SHOX2-203ENST00000441443 CT45A10P0DMU9 189 aa15.98■□□□□ 0.15
SHOX2-203ENST00000441443 SIGLEC15Q6ZMC9 328 aa15.98■□□□□ 0.15
SHOX2-203ENST00000441443 NHP2Q9NX24 153 aaKnown RBP15.98■□□□□ 0.15
SHOX2-203ENST00000441443 K7EQM0 130 aa15.98■□□□□ 0.15
SHOX2-203ENST00000441443 VGLL1Q99990 258 aa15.98■□□□□ 0.15
SHOX2-203ENST00000441443 WI2-2373I1.2A0A1W2PRP0 233 aa15.97■□□□□ 0.15
SHOX2-203ENST00000441443 TMEM189A5PLL7 270 aa15.97■□□□□ 0.15
SHOX2-203ENST00000441443 WFDC2Q14508 124 aa15.97■□□□□ 0.15
SHOX2-203ENST00000441443 TEX36Q5VZQ5 186 aa15.97■□□□□ 0.15
SHOX2-203ENST00000441443 Q6AWC8 147 aa15.97■□□□□ 0.15
SHOX2-203ENST00000441443 FAM169BQ8N8A8 192 aa15.97■□□□□ 0.15
SHOX2-203ENST00000441443 CHAC1Q9BUX1 264 aa15.97■□□□□ 0.15
SHOX2-203ENST00000441443 PRRG2O14669 202 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 PRR30Q53SZ7 412 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-203ENST00000441443 LYPD2Q6UXB3 125 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 FAM57AQ8TBR7 257 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 PPIAL4EA0A075B759 164 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 TRBV6-1A0A0K0K1D8 114 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 PPIAL4FP0DN26 164 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 TWIST1Q15672 202 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 PVRIGQ6DKI7 326 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 CLUHP3Q96NS8 147 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 SCNM1Q9BWG6 230 aa15.96■□□□□ 0.15
SHOX2-203ENST00000441443 A0A0G2JNJ9 132 aa15.95■□□□□ 0.14
SHOX2-203ENST00000441443 GAS8-AS1O95177 125 aa15.95■□□□□ 0.14
SHOX2-203ENST00000441443 FOXC1Q12948 553 aa15.95■□□□□ 0.14
SHOX2-203ENST00000441443 MTURNQ8N3F0 131 aa15.95■□□□□ 0.14
SHOX2-203ENST00000441443 Q9UFV3 132 aa15.95■□□□□ 0.14
SHOX2-203ENST00000441443 IGKV1-17P01599 117 aa15.95■□□□□ 0.14
SHOX2-203ENST00000441443 GAGE12HA6NDE8 117 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 SH2D1AO60880 128 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 CEACAM3P40198 252 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 Q5PR19 223 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 GFRALQ6UXV0 394 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 GTSCR1Q86UQ5 136 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 CCL17Q92583 94 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 MC5RP33032 325 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 IGF2-ASQ6U949 168 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 SH2D6Q7Z4S9 175 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 PHLDA1Q8WV24 401 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-203ENST00000441443 PRSS1P07477 247 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 HHLA3Q9XRX5 114 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 S4R3C0 116 aa15.94■□□□□ 0.14
SHOX2-203ENST00000441443 C16orf97H3BN30 126 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 TMEM108Q6UXF1 575 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 MALRD1Q5VYJ5 2156 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 TRBV25-1A0A075B6N4 114 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 BSPH1Q075Z2 132 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 ZNF562Q6V9R5 426 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 SHANK2-AS3Q9BTD1 123 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 MSRB1Q9NZV6 116 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 SIGLEC9Q9Y336 463 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 CSMD1Q96PZ7 3565 aa15.93■□□□□ 0.14
SHOX2-203ENST00000441443 TEX22C9J3V5 150 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 LEPP41159 167 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 CD300EQ496F6 205 aaPredicted RBP15.92■□□□□ 0.14
SHOX2-203ENST00000441443 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.92■□□□□ 0.14
SHOX2-203ENST00000441443 ODF1Q14990 250 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 H3BMG7 143 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 ETDBQ3ZM63 59 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 AMTNQ6UX39 209 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 ARPC1AQ92747 370 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 FBXL15Q9H469 300 aa15.92■□□□□ 0.14
SHOX2-203ENST00000441443 SPANXB1Q9NS25 103 aaPredicted RBP15.92■□□□□ 0.14
SHOX2-203ENST00000441443 I3L2K1 104 aa15.91■□□□□ 0.14
SHOX2-203ENST00000441443 IGKV2-40A0A087WW87 121 aaPredicted RBP15.91■□□□□ 0.14
SHOX2-203ENST00000441443 IGKV2D-40P01614 121 aaPredicted RBP15.91■□□□□ 0.14
SHOX2-203ENST00000441443 IL4P05112 153 aa15.91■□□□□ 0.14
SHOX2-203ENST00000441443 EVI2AP22794 236 aa15.91■□□□□ 0.14
SHOX2-203ENST00000441443 H3BRN7 92 aa15.9■□□□□ 0.14
SHOX2-203ENST00000441443 LINC00311Q8N616 119 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms