RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 RPUSD4Q96CM3 377 aaKnown RBP6.32□□□□□ -1.4
RBM39-208ENST00000416108 CITED4Q96RK1 184 aa6.32□□□□□ -1.4
RBM39-208ENST00000416108 ATG101Q9BSB4 218 aa6.32□□□□□ -1.4
RBM39-208ENST00000416108 ZMAT5Q9UDW3 170 aaKnown RBP6.32□□□□□ -1.4
RBM39-208ENST00000416108 EPDR1Q9UM22 224 aa6.32□□□□□ -1.4
RBM39-208ENST00000416108 TRAV8-2A0A0B4J237 113 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 SCO2A0A1W2PP80 73 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 TMEM250H0YL14 139 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 M0R3E3 92 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 SOCS3O14543 225 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 TCRAP04437 139 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 S100A9P06702 114 aaKnown RBP6.31□□□□□ -1.4
RBM39-208ENST00000416108 SRP19P09132 144 aaKnown RBP6.31□□□□□ -1.4
RBM39-208ENST00000416108 IGLL1P15814 213 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 HLA-DMBP28068 263 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 CD81P60033 236 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 UBE2G1P62253 170 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 GNG5P63218 68 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 PSMG4Q5JS54 123 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 EBLN2Q6P2I7 272 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 EIF4E3Q8N5X7 224 aaKnown RBP6.31□□□□□ -1.4
RBM39-208ENST00000416108 RNF182Q8N6D2 247 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 ARL6IP6Q8N6S5 226 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 CYB561D1Q8N8Q1 229 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 OR10J6PQ8NGY7 276 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 DCANP1Q8TF63 244 aa6.31□□□□□ -1.4
RBM39-208ENST00000416108 AGRNO00468 2067 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 IZUMO1RA6ND01 250 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 FBLL1A6NHQ2 334 aaKnown RBP6.3□□□□□ -1.4
RBM39-208ENST00000416108 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 DEFB131AP59861 70 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
RBM39-208ENST00000416108 ZNF674Q2M3X9 581 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 KRTAP21-3Q3LHN1 58 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 GOLT1AQ6ZVE7 132 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 CCDC28AQ8IWP9 274 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 C11orf52Q96A22 123 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 NDFIP1Q9BT67 221 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 SLC35B3Q9H1N7 401 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 PPP1R14DQ9NXH3 145 aa6.3□□□□□ -1.4
RBM39-208ENST00000416108 RBAKDNA6NC62 111 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 ZNF727A8MUV8 499 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
RBM39-208ENST00000416108 OR11H12B2RN74 326 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 F8W036 122 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
RBM39-208ENST00000416108 SFTA3P0C7M3 94 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 HIST1H1AQ02539 215 aaPredicted RBP6.29□□□□□ -1.4
RBM39-208ENST00000416108 FAM74A3Q4VXF1 159 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 SOHLH1Q5JUK2 328 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 TMEM78Q5T7P6 136 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 SLC7A5P1Q8MH63 180 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 TMEM75Q8N9X5 138 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 SPATA3Q8NHX4 192 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 FMC1Q96HJ9 113 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 SMIM7Q9BQ49 75 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 PARLQ9H300 379 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 MAP6D1Q9H9H5 199 aa6.29□□□□□ -1.4
RBM39-208ENST00000416108 IGKV2-40A0A087WW87 121 aaPredicted RBP6.28□□□□□ -1.4
RBM39-208ENST00000416108 IGKV2D-40P01614 121 aaPredicted RBP6.28□□□□□ -1.4
RBM39-208ENST00000416108 RPL35P42766 123 aaKnown RBP6.28□□□□□ -1.4
RBM39-208ENST00000416108 GNG4P50150 75 aa6.28□□□□□ -1.4
RBM39-208ENST00000416108 TAS2R60P59551 318 aa6.28□□□□□ -1.4
RBM39-208ENST00000416108 FLI1Q01543 452 aaPredicted RBP6.28□□□□□ -1.4
RBM39-208ENST00000416108 TMEM183BQ1AE95 376 aa6.28□□□□□ -1.4
RBM39-208ENST00000416108 FOXI2Q6ZQN5 318 aa6.28□□□□□ -1.4
RBM39-208ENST00000416108 PRNTQ86SH4 94 aa6.28□□□□□ -1.4
RBM39-208ENST00000416108 FAM24BQ8N5W8 94 aa6.28□□□□□ -1.4
RBM39-208ENST00000416108 OR8A1Q8NGG7 326 aa6.28□□□□□ -1.4
RBM39-208ENST00000416108 ZNF256Q9Y2P7 627 aaPredicted RBP6.28□□□□□ -1.4
RBM39-208ENST00000416108 TRAV34A0A0B4J273 112 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 KRBOX1C9JBD0 128 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 C9JQL5 133 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 PRAC2D3DTV9 90 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 WIPF1O43516 503 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 BEAN1Q3B7T3 259 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 OXLD1Q5BKU9 147 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 STHQ8IWL8 128 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 OR4B1Q8NGF8 309 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 C2CD4CQ8TF44 421 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 SGK494Q96LW2 274 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 LINC00477Q96M19 166 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 FAM110AQ9BQ89 295 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 NIPSNAP3BQ9BS92 247 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 SAV1Q9H4B6 383 aaPredicted RBP6.27□□□□□ -1.41
RBM39-208ENST00000416108 PSG8Q9UQ74 426 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 STAB1Q9NY15 2570 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 COL6A5A8TX70 2615 aa6.27□□□□□ -1.41
RBM39-208ENST00000416108 A0A0J9YX75 114 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 TRBV6-1A0A0K0K1D8 114 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 KNCNA6PVL3 124 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 NPIPB6E9PJ23 425 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 F6UB75 175 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 CD7P09564 240 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 ZNF705DP0CH99 300 aaPredicted RBP6.26□□□□□ -1.41
RBM39-208ENST00000416108 ZNF705BP0CI00 300 aaPredicted RBP6.26□□□□□ -1.41
RBM39-208ENST00000416108 CT45A10P0DMU9 189 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms