RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.94■□□□□ 0.14
USP39-203ENST00000409470 NPIPB6E9PJ23 425 aa15.94■□□□□ 0.14
USP39-203ENST00000409470 FSHBP01225 129 aa15.94■□□□□ 0.14
USP39-203ENST00000409470 IGLV1-40P01703 118 aa15.94■□□□□ 0.14
USP39-203ENST00000409470 AMBPP02760 352 aa15.94■□□□□ 0.14
USP39-203ENST00000409470 TMEM95Q3KNT9 176 aa15.94■□□□□ 0.14
USP39-203ENST00000409470 LCNL1Q6ZST4 164 aa15.94■□□□□ 0.14
USP39-203ENST00000409470 OR2D3Q8NGH3 330 aa15.94■□□□□ 0.14
USP39-203ENST00000409470 A0A0G2JLM5 398 aa15.93■□□□□ 0.14
USP39-203ENST00000409470 A0A1B0GUS0 222 aa15.93■□□□□ 0.14
USP39-203ENST00000409470 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.93■□□□□ 0.14
USP39-203ENST00000409470 OR4X2Q8NGF9 303 aa15.93■□□□□ 0.14
USP39-203ENST00000409470 WIPF2Q8TF74 440 aaPredicted RBP15.93■□□□□ 0.14
USP39-203ENST00000409470 CT45A10P0DMU9 189 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 PYY3Q5JQD4 70 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 LCN12Q6JVE5 192 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 PRSS57Q6UWY2 283 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 GTSF1Q8WW33 167 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 C8orf49Q96NF6 230 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 GFRA4Q9GZZ7 299 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 U3KQE9 123 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 ZNF705FA8MVS1 300 aaPredicted RBP15.92■□□□□ 0.14
USP39-203ENST00000409470 NDUFA4O00483 81 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 IGHG4P01861 327 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 APCSP02743 223 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 PLA2G2AP14555 144 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 CFHR3Q02985 330 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 KIAA1644Q3SXP7 199 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 CYB5R2Q6BCY4 276 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 ATP5L2Q7Z4Y8 100 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 TMEM256Q8N2U0 113 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 SLC50A1Q9BRV3 221 aa15.92■□□□□ 0.14
USP39-203ENST00000409470 FBLL1A6NHQ2 334 aaKnown RBP15.91■□□□□ 0.14
USP39-203ENST00000409470 C9orf139Q6ZV77 190 aa15.91■□□□□ 0.14
USP39-203ENST00000409470 TMEM18Q96B42 140 aa15.91■□□□□ 0.14
USP39-203ENST00000409470 PGLYRP4Q96LB8 373 aa15.91■□□□□ 0.14
USP39-203ENST00000409470 J3QKU1 62 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 CAMPP49913 170 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 UNQ9165/PRO28630Q6UXU0 137 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 KRTAP1-3Q8IUG1 177 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 ZNF580Q9UK33 172 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 VPREB3Q9UKI3 123 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 ZANQ9Y493 2812 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 GZMBP10144 247 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 SAPCD1Q5SSQ6 148 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 HIST2H2BCQ6DN03 193 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 Q6YL49 198 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 RBPMS2Q6ZRY4 209 aaKnown RBP15.9■□□□□ 0.14
USP39-203ENST00000409470 RNF182Q8N6D2 247 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 VGLL1Q99990 258 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 CHD6Q8TD26 2715 aa15.9■□□□□ 0.14
USP39-203ENST00000409470 FAM231BA6NCW3 169 aa15.89■□□□□ 0.13
USP39-203ENST00000409470 CRIP1P50238 77 aa15.89■□□□□ 0.13
USP39-203ENST00000409470 C16orf54Q6UWD8 224 aa15.89■□□□□ 0.13
USP39-203ENST00000409470 BAGE3Q86Y29 109 aa15.89■□□□□ 0.13
USP39-203ENST00000409470 DOPEY2Q9Y3R5 2298 aa15.89■□□□□ 0.13
USP39-203ENST00000409470 GDF5OSQ5U4N7 250 aa15.89■□□□□ 0.13
USP39-203ENST00000409470 HBBP68871 147 aa15.88■□□□□ 0.13
USP39-203ENST00000409470 SLAQ13239 276 aa15.88■□□□□ 0.13
USP39-203ENST00000409470 Q8TAT8 98 aa15.88■□□□□ 0.13
USP39-203ENST00000409470 PRR25Q96S07 402 aa15.88■□□□□ 0.13
USP39-203ENST00000409470 PRRC2AP48634 2157 aaKnown RBP15.87■□□□□ 0.13
USP39-203ENST00000409470 A0A1B0GXF2 115 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 NUPR1O60356 82 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 Q0VG73 95 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 C8orf86Q6ZUL3 223 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 NPFFR1Q9GZQ6 430 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 TP53TG3Q9ULZ0 132 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 CREBBPQ92793 2442 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 SRIP30626 198 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 FAM209BQ5JX69 171 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 GLMPQ8WWB7 406 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 APCP25054 2843 aa15.87■□□□□ 0.13
USP39-203ENST00000409470 PRAC2D3DTV9 90 aa15.86■□□□□ 0.13
USP39-203ENST00000409470 HOXA3O43365 443 aaPredicted RBP15.86■□□□□ 0.13
USP39-203ENST00000409470 SSBP4Q9BWG4 385 aaPredicted RBP15.86■□□□□ 0.13
USP39-203ENST00000409470 SERF1AO75920 110 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 PSMB8P28062 276 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 FAM162BQ5T6X4 162 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 NDFIP1Q9BT67 221 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 TENM4Q6N022 2769 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 TRAV8-2A0A0B4J237 113 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 F2Z2F3 143 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 SMAD7O15105 426 aaKnown RBP15.85■□□□□ 0.13
USP39-203ENST00000409470 SH2D1AO60880 128 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 ERCC8Q13216 396 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 PSMG3-AS1Q96PY0 264 aa15.85■□□□□ 0.13
USP39-203ENST00000409470 PEF1Q9UBV8 284 aaKnown RBP15.85■□□□□ 0.13
USP39-203ENST00000409470 OR10J3Q5JRS4 329 aa15.84■□□□□ 0.13
USP39-203ENST00000409470 COX8CQ7Z4L0 72 aa15.84■□□□□ 0.13
USP39-203ENST00000409470 C16orf92Q96LL3 132 aa15.84■□□□□ 0.13
USP39-203ENST00000409470 A0A1W2PS18 150 aa15.84■□□□□ 0.13
USP39-203ENST00000409470 RBAKDNA6NC62 111 aa15.84■□□□□ 0.13
USP39-203ENST00000409470 FOXA3P55318 350 aaPredicted RBP15.84■□□□□ 0.13
USP39-203ENST00000409470 WFDC11Q8NEX6 87 aa15.84■□□□□ 0.13
USP39-203ENST00000409470 KMT2BQ9UMN6 2715 aaPredicted RBP15.83■□□□□ 0.13
USP39-203ENST00000409470 CDPF1Q6NVV7 123 aa15.83■□□□□ 0.12
USP39-203ENST00000409470 C10orf99Q6UWK7 81 aa15.83■□□□□ 0.12
USP39-203ENST00000409470 TMEM89A2RUT3 159 aa15.82■□□□□ 0.12
USP39-203ENST00000409470 TMEM189A5PLL7 270 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms