RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 NDUFS7O75251 213 aa13.06□□□□□ -0.32
SHANK1-204ENST00000391814 TMEM219Q86XT9 240 aa13.05□□□□□ -0.32
SHANK1-204ENST00000391814 SPANXDQ9BXN6 97 aa13.05□□□□□ -0.32
SHANK1-204ENST00000391814 CFPP27918 469 aa13.05□□□□□ -0.32
SHANK1-204ENST00000391814 DEFB125Q8N687 156 aa13.05□□□□□ -0.32
SHANK1-204ENST00000391814 NPYP01303 97 aa13.05□□□□□ -0.32
SHANK1-204ENST00000391814 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
SHANK1-204ENST00000391814 IGKV1-16P04430 117 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
SHANK1-204ENST00000391814 TINCRA0A1B0GVN0 87 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 SRRM5B3KS81 715 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 NUPR1O60356 82 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 HAMPP81172 84 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
SHANK1-204ENST00000391814 K7EMI3 77 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 RPL36AP83881 106 aaKnown RBP13.04□□□□□ -0.32
SHANK1-204ENST00000391814 SPACA3Q8IXA5 215 aa13.04□□□□□ -0.32
SHANK1-204ENST00000391814 RPL36ALQ969Q0 106 aaKnown RBP13.04□□□□□ -0.32
SHANK1-204ENST00000391814 CLPSL1A2RUU4 121 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 DKK1O94907 266 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 HLA-DMBP28068 263 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 TRBV7-1A0A0A6YYK4 115 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 C9orf139Q6ZV77 190 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 UBL5Q9BZL1 73 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 SCRT2Q9NQ03 307 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 IL18BPO95998 194 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 EFNA4P52798 201 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 RBM3P98179 157 aaKnown RBP13.03□□□□□ -0.32
SHANK1-204ENST00000391814 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
SHANK1-204ENST00000391814 IGLV3-12A0A075B6K2 115 aa13.02□□□□□ -0.32
SHANK1-204ENST00000391814 IGKV1D-17A0A075B6S4 117 aa13.02□□□□□ -0.32
SHANK1-204ENST00000391814 IGHG4P01861 327 aa13.02□□□□□ -0.32
SHANK1-204ENST00000391814 KLF5Q13887 457 aaPredicted RBP13.02□□□□□ -0.33
SHANK1-204ENST00000391814 BUB1B-PAK6H3BSN5 160 aa13.02□□□□□ -0.33
SHANK1-204ENST00000391814 C5orf47Q569G3 176 aa13.01□□□□□ -0.33
SHANK1-204ENST00000391814 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
SHANK1-204ENST00000391814 RALGAPA1Q6GYQ0 2036 aa13.01□□□□□ -0.33
SHANK1-204ENST00000391814 PRSS22Q9GZN4 317 aa13.01□□□□□ -0.33
SHANK1-204ENST00000391814 TRAV25A0A0B4J276 109 aa13.01□□□□□ -0.33
SHANK1-204ENST00000391814 FAM231DQ6ZW35 169 aa13.01□□□□□ -0.33
SHANK1-204ENST00000391814 I3L3M4 83 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 IGKV1-39P01597 117 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 IGKV1D-39P04432 117 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 TRPM7Q96QT4 1865 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 KMT2EQ8IZD2 1858 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 E9PQ18 207 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 THBDP07204 575 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 CGB3P0DN86 165 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 TMEM14BQ9NUH8 114 aa13□□□□□ -0.33
SHANK1-204ENST00000391814 SIP14410 1827 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 PFN2P35080 140 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 LY6DQ14210 128 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 LYPD6BQ8NI32 183 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 LHBP01229 141 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 HOXD3P31249 432 aaPredicted RBP12.99□□□□□ -0.33
SHANK1-204ENST00000391814 A0A1W2PPI3 338 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 TMEM258P61165 79 aa12.99□□□□□ -0.33
SHANK1-204ENST00000391814 IGLL5B9A064 214 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 G3V4G9 280 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 IGLC1P0CG04 106 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 TMEM178BH3BS89 294 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 CFHR3Q02985 330 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 KIF26BQ2KJY2 2108 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 C3orf56Q8N813 242 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 IGHV3-16A0A0C4DH30 117 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 SS18Q15532 418 aa12.98□□□□□ -0.33
SHANK1-204ENST00000391814 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 PDE6HQ13956 83 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 ICE1Q9Y2F5 2266 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 KNCNA6PVL3 124 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 DEFB130BP0DP73 79 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 DEFB130AP0DP74 79 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 KLK9Q9UKQ9 250 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 SHISA9B4DS77 424 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 CRLF1O75462 422 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 MRPL23Q16540 153 aaKnown RBP12.97□□□□□ -0.33
SHANK1-204ENST00000391814 MSRB2Q9Y3D2 182 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 TCTEX1D4Q5JR98 221 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 LINC00173Q6ZV60 143 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 NDUFA12Q9UI09 145 aa12.97□□□□□ -0.33
SHANK1-204ENST00000391814 PRSS29PA6NIE9 313 aa12.96□□□□□ -0.33
SHANK1-204ENST00000391814 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.33
SHANK1-204ENST00000391814 NDUFS5O43920 106 aa12.96□□□□□ -0.33
SHANK1-204ENST00000391814 CGB7P0DN87 165 aa12.96□□□□□ -0.33
SHANK1-204ENST00000391814 VWCEQ96DN2 955 aa12.96□□□□□ -0.33
SHANK1-204ENST00000391814 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
SHANK1-204ENST00000391814 DSCR8Q96T75 97 aa12.96□□□□□ -0.33
SHANK1-204ENST00000391814 ZNF747Q9BV97 191 aa12.96□□□□□ -0.33
SHANK1-204ENST00000391814 F8VRH5 84 aa12.96□□□□□ -0.34
SHANK1-204ENST00000391814 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.34
SHANK1-204ENST00000391814 TAX1BP3O14907 124 aa12.96□□□□□ -0.34
SHANK1-204ENST00000391814 IGHV3-38A0A0C4DH36 116 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 CASP8AP2Q9UKL3 1982 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 J3QQQ9 107 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 FREM3P0C091 2139 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 SPANXCQ9NY87 97 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms