RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RPL24P83731 157 aaKnown RBP12.96□□□□□ -0.34
TRIM39-201ENST00000376656 TWIST1Q15672 202 aa12.95□□□□□ -0.34
TRIM39-201ENST00000376656 TMEM108Q6UXF1 575 aa12.95□□□□□ -0.34
TRIM39-201ENST00000376656 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-201ENST00000376656 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
TRIM39-201ENST00000376656 GOSR1O95249 250 aa12.95□□□□□ -0.34
TRIM39-201ENST00000376656 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-201ENST00000376656 CEP250Q9BV73 2442 aa12.95□□□□□ -0.34
TRIM39-201ENST00000376656 GAS8-AS1O95177 125 aa12.95□□□□□ -0.34
TRIM39-201ENST00000376656 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-201ENST00000376656 Q5PR19 223 aa12.95□□□□□ -0.34
TRIM39-201ENST00000376656 PLGLAQ15195 96 aa12.94□□□□□ -0.34
TRIM39-201ENST00000376656 SMIM17P0DL12 118 aa12.94□□□□□ -0.34
TRIM39-201ENST00000376656 LAMA5O15230 3695 aa12.94□□□□□ -0.34
TRIM39-201ENST00000376656 IGLV1-47P01700 117 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 AAMDCQ9H7C9 122 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 CEACAM3P40198 252 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 K7EMI3 77 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 GNG7O60262 68 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 CNIH1O95406 144 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 ZNF80P51504 273 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-201ENST00000376656 BSPH1Q075Z2 132 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 KLF17Q5JT82 389 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-201ENST00000376656 Q8TAT8 98 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 HHLA3Q9XRX5 114 aa12.93□□□□□ -0.34
TRIM39-201ENST00000376656 BUB1B-PAK6H3BSN5 160 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 ODF1Q14990 250 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 ASCL5Q7RTU5 278 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 CHAC1Q9BUX1 264 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 ZGRF1Q86YA3 2104 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 PPIAL4CA0A0B4J2A2 164 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 COX7A1P24310 79 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 ZNF562Q6V9R5 426 aa12.92□□□□□ -0.34
TRIM39-201ENST00000376656 LEPP41159 167 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
TRIM39-201ENST00000376656 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
TRIM39-201ENST00000376656 NPIPB5A8MRT5 1133 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 CEACAM4O75871 244 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 RNF185Q96GF1 192 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 PRR25Q96S07 402 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 ADGRG4Q8IZF6 3080 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 CIDEAO60543 219 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 TACC2O95359 2948 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 ZNF575Q86XF7 245 aa12.91□□□□□ -0.34
TRIM39-201ENST00000376656 PHLDA1Q8WV24 401 aaPredicted RBP12.91□□□□□ -0.34
TRIM39-201ENST00000376656 PIFOQ8TCI5 191 aa12.9□□□□□ -0.34
TRIM39-201ENST00000376656 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
TRIM39-201ENST00000376656 HIGD1BQ9P298 99 aa12.9□□□□□ -0.34
TRIM39-201ENST00000376656 KAAG1Q9UBP8 84 aa12.9□□□□□ -0.34
TRIM39-201ENST00000376656 MAP1BP46821 2468 aaKnown RBP12.9□□□□□ -0.34
TRIM39-201ENST00000376656 EVI2AP22794 236 aa12.9□□□□□ -0.34
TRIM39-201ENST00000376656 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
TRIM39-201ENST00000376656 MAP1LC3AQ9H492 121 aa12.9□□□□□ -0.34
TRIM39-201ENST00000376656 PRSS1P07477 247 aa12.9□□□□□ -0.35
TRIM39-201ENST00000376656 IGLC6P0CF74 106 aa12.9□□□□□ -0.35
TRIM39-201ENST00000376656 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.35
TRIM39-201ENST00000376656 TNFRSF14Q92956 283 aa12.9□□□□□ -0.35
TRIM39-201ENST00000376656 NHP2Q9NX24 153 aaKnown RBP12.9□□□□□ -0.35
TRIM39-201ENST00000376656 TRBV25-1A0A075B6N4 114 aa12.89□□□□□ -0.35
TRIM39-201ENST00000376656 PDE6HQ13956 83 aa12.89□□□□□ -0.35
TRIM39-201ENST00000376656 IGFBPL1Q8WX77 278 aa12.89□□□□□ -0.35
TRIM39-201ENST00000376656 RPEQ96AT9 228 aa12.89□□□□□ -0.35
TRIM39-201ENST00000376656 VGLL1Q99990 258 aa12.89□□□□□ -0.35
TRIM39-201ENST00000376656 GTSF1LQ9H1H1 148 aa12.89□□□□□ -0.35
TRIM39-201ENST00000376656 TPRP12270 2363 aaKnown RBP12.89□□□□□ -0.35
TRIM39-201ENST00000376656 THBDP07204 575 aa12.89□□□□□ -0.35
TRIM39-201ENST00000376656 CFAP161Q6P656 301 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 GFRALQ6UXV0 394 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 PCNX1Q96RV3 2341 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 CSMD1Q96PZ7 3565 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
TRIM39-201ENST00000376656 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
TRIM39-201ENST00000376656 AZU1P20160 251 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 FCER1GP30273 86 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 RNASE6Q93091 150 aaKnown RBP12.88□□□□□ -0.35
TRIM39-201ENST00000376656 FOXC2Q99958 501 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 IGKCP01834 107 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 HLA-DMBP28068 263 aa12.88□□□□□ -0.35
TRIM39-201ENST00000376656 COX8CQ7Z4L0 72 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 S100A7AQ86SG5 101 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 MGAQ8IWI9 3026 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 C16orf97H3BN30 126 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 CUL9Q8IWT3 2517 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 ZC2HC1BQ5TFG8 222 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 DYNLRB1Q9NP97 96 aa12.87□□□□□ -0.35
TRIM39-201ENST00000376656 ORM1P02763 201 aa12.86□□□□□ -0.35
TRIM39-201ENST00000376656 WFDC2Q14508 124 aa12.86□□□□□ -0.35
TRIM39-201ENST00000376656 CEND1Q8N111 149 aa12.86□□□□□ -0.35
TRIM39-201ENST00000376656 LINC01546A6NGU7 62 aa12.86□□□□□ -0.35
TRIM39-201ENST00000376656 SHISA9B4DS77 424 aa12.86□□□□□ -0.35
TRIM39-201ENST00000376656 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
TRIM39-201ENST00000376656 RALYQ9UKM9 306 aaKnown RBP12.86□□□□□ -0.35
TRIM39-201ENST00000376656 TIMM23O14925 209 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 PPIFP30405 207 aaKnown RBP12.85□□□□□ -0.35
TRIM39-201ENST00000376656 SMAGPQ0VAQ4 97 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms