RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PET117Q6UWS5 81 aa7.32□□□□□ -1.24
TOP1-201ENST00000361337 URB1-AS1Q96HZ7 61 aa7.32□□□□□ -1.24
TOP1-201ENST00000361337 TTTY13Q9BZ97 58 aa7.32□□□□□ -1.24
TOP1-201ENST00000361337 TEP1Q99973 2627 aaKnown RBP7.32□□□□□ -1.24
TOP1-201ENST00000361337 THBDP07204 575 aa7.32□□□□□ -1.24
TOP1-201ENST00000361337 ZNF672Q499Z4 452 aaPredicted RBP7.32□□□□□ -1.24
TOP1-201ENST00000361337 TEX29Q8N6K0 151 aa7.32□□□□□ -1.24
TOP1-201ENST00000361337 ANKRD17O75179 2603 aaKnown RBP7.32□□□□□ -1.24
TOP1-201ENST00000361337 FAM90A9PA6NNJ1 464 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 LYZP61626 148 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 SYT8Q8NBV8 401 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 NUP35Q8NFH5 326 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 JPT1Q9UK76 154 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 TRAV8-2A0A0B4J237 113 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 C2orf70A6NJV1 201 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 E7EUB6 86 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 REG1AP05451 166 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 C17orf58Q2M2W7 97 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 RABAC1Q9UI14 185 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 FOXA2Q9Y261 457 aaPredicted RBP7.31□□□□□ -1.24
TOP1-201ENST00000361337 J3QR06 171 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 RBP4P02753 201 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 HERV-K104P63124 156 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 WFDC2Q14508 124 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 KHDC1LQ5JSQ8 128 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 FAM167A-AS1Q96KT0 104 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 ZNF714Q96N38 554 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 SLC25A2Q9BXI2 301 aa7.31□□□□□ -1.24
TOP1-201ENST00000361337 CKS2P33552 79 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 Q71RC1 249 aaPredicted RBP7.3□□□□□ -1.24
TOP1-201ENST00000361337 GTSCR1Q86UQ5 136 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 DEFB125Q8N687 156 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 CCL19Q99731 98 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 SLC25A33Q9BSK2 321 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 INSIG2Q9Y5U4 225 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.3□□□□□ -1.24
TOP1-201ENST00000361337 SEC11AP67812 179 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 FOXE3Q13461 319 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 RUSC1-AS1Q66K80 236 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 NPIPB3Q92617 1050 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 IGHV3-35A0A0C4DH35 117 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 H0YJW9 148 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 SNCGO76070 127 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 TOMM40O96008 361 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 MOSP00540 346 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 ERHP84090 104 aaKnown RBP7.3□□□□□ -1.24
TOP1-201ENST00000361337 HCP5Q6MZN7 132 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 MBD6Q96DN6 1003 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 DUX5Q96PT3 197 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 S4R3C0 116 aa7.3□□□□□ -1.24
TOP1-201ENST00000361337 C19orf84I3L1E1 186 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 LY6EQ16553 131 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 C10orf113Q5VZT2 155 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 CFAP161Q6P656 301 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 LINC00322Q6ZN03 302 aaPredicted RBP7.29□□□□□ -1.24
TOP1-201ENST00000361337 OR5A1Q8NGJ0 315 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 F2RL2O00254 374 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 ORM1P02763 201 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 KLRD1Q13241 179 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 CD300EQ496F6 205 aaPredicted RBP7.29□□□□□ -1.24
TOP1-201ENST00000361337 FAM120AOSQ5T036 256 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 GOLT1AQ6ZVE7 132 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 FAM222BQ8WU58 562 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 HARBI1Q96MB7 349 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 RAB9BQ9NP90 201 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 TANC2Q9HCD6 1990 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 TRAV8-1A0A0A6YYK1 113 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 PSMB11A5LHX3 300 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 SRRM5B3KS81 715 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 NCR2O95944 276 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 IGLC1P0CG04 106 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 C8orf88P0DMB2 117 aa7.29□□□□□ -1.24
TOP1-201ENST00000361337 MRPL36Q9P0J6 103 aaKnown RBP7.29□□□□□ -1.24
TOP1-201ENST00000361337 C9orf118A6NHY6 69 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 NDUFA3O95167 84 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 FCGR2BP31994 310 aaPredicted RBP7.28□□□□□ -1.24
TOP1-201ENST00000361337 C10orf55Q5SWW7 151 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 FOXC2Q99958 501 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 K7EP34 96 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 IL4P05112 153 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 CGB3P0DN86 165 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 CGB7P0DN87 165 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 TWIST1Q15672 202 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 PATE2Q6UY27 113 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 BPESC1Q9GZL8 116 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 MRPL27Q9P0M9 148 aaKnown RBP7.28□□□□□ -1.24
TOP1-201ENST00000361337 RNASE2P10153 161 aaKnown RBP7.28□□□□□ -1.24
TOP1-201ENST00000361337 PRCDQ00LT1 54 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 RIGQ13278 110 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 ZNF329Q86UD4 541 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 CYSLTR1Q9Y271 337 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 LRBAP50851 2863 aa7.28□□□□□ -1.24
TOP1-201ENST00000361337 PCP2Q8IVA1 136 aa7.27□□□□□ -1.25
TOP1-201ENST00000361337 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
TOP1-201ENST00000361337 UPK2O00526 184 aa7.27□□□□□ -1.25
TOP1-201ENST00000361337 IGLV1-44P01699 117 aa7.27□□□□□ -1.25
TOP1-201ENST00000361337 SAA1P0DJI8 122 aaPredicted RBP7.27□□□□□ -1.25
TOP1-201ENST00000361337 CR1LQ2VPA4 569 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms