RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RUSC1-AS1Q66K80 236 aa11.98□□□□□ -0.49
LMX1B-201ENST00000355497 IGHV1OR15-1A0A075B7D0 117 aa11.98□□□□□ -0.49
LMX1B-201ENST00000355497 Q6ZRM9 215 aa11.98□□□□□ -0.49
LMX1B-201ENST00000355497 C3orf56Q8N813 242 aa11.98□□□□□ -0.49
LMX1B-201ENST00000355497 NXPH4O95158 308 aa11.98□□□□□ -0.49
LMX1B-201ENST00000355497 PRSS57Q6UWY2 283 aa11.98□□□□□ -0.49
LMX1B-201ENST00000355497 CHKB-CPT1BH3BT56 60 aa11.98□□□□□ -0.49
LMX1B-201ENST00000355497 GAGE6Q13070 117 aa11.97□□□□□ -0.49
LMX1B-201ENST00000355497 MRPL51Q4U2R6 128 aaKnown RBP11.97□□□□□ -0.49
LMX1B-201ENST00000355497 K7EP34 96 aa11.97□□□□□ -0.49
LMX1B-201ENST00000355497 TRBV19A0A075B6N1 114 aa11.97□□□□□ -0.49
LMX1B-201ENST00000355497 TRAV26-2A0A0B4J265 109 aa11.97□□□□□ -0.49
LMX1B-201ENST00000355497 SDHAF1A6NFY7 115 aa11.97□□□□□ -0.49
LMX1B-201ENST00000355497 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
LMX1B-201ENST00000355497 TRAV13-2A0A0B4J235 113 aa11.96□□□□□ -0.49
LMX1B-201ENST00000355497 UBE2E1P51965 193 aa11.96□□□□□ -0.49
LMX1B-201ENST00000355497 ZNRF2Q8NHG8 242 aa11.96□□□□□ -0.49
LMX1B-201ENST00000355497 HLA-DRB4P13762 266 aa11.96□□□□□ -0.49
LMX1B-201ENST00000355497 RMI2Q96E14 147 aa11.96□□□□□ -0.49
LMX1B-201ENST00000355497 HLA-DRB4X5D2U9 266 aa11.96□□□□□ -0.49
LMX1B-201ENST00000355497 LRRC37AA6NMS7 1700 aa11.96□□□□□ -0.49
LMX1B-201ENST00000355497 NBL1P41271 181 aa11.96□□□□□ -0.5
LMX1B-201ENST00000355497 DOCK4Q8N1I0 1966 aa11.96□□□□□ -0.5
LMX1B-201ENST00000355497 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.5
LMX1B-201ENST00000355497 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.5
LMX1B-201ENST00000355497 CGB7P0DN87 165 aa11.96□□□□□ -0.5
LMX1B-201ENST00000355497 CARD19Q96LW7 228 aa11.96□□□□□ -0.5
LMX1B-201ENST00000355497 ASXL3Q9C0F0 2248 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 GAGE7O76087 117 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 GAGE12FP0CL80 117 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 GAGE12GP0CL81 117 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 GAGE12IP0CL82 117 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 B3GALT5-AS1P59052 145 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 CEND1Q8N111 149 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 GATA3P23771 443 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 PAX9P55771 341 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 SMIM2Q9BVW6 85 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 TMEM14BQ9NUH8 114 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 A0A1B0GUS0 222 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 TINCRA0A1B0GVN0 87 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 LY6HO94772 140 aa11.95□□□□□ -0.5
LMX1B-201ENST00000355497 LGALS9BQ3B8N2 356 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 C8orf86Q6ZUL3 223 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 NDUFA4L2Q9NRX3 87 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 COX8AP10176 69 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 PRO1854Q9UHT4 67 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 PRSS29PA6NIE9 313 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 MSMBP08118 114 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 ATP6V0BQ99437 205 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 PSME4Q14997 1843 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 E7EQL1 145 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 EGR2P11161 476 aaPredicted RBP11.94□□□□□ -0.5
LMX1B-201ENST00000355497 VWC2Q2TAL6 325 aa11.94□□□□□ -0.5
LMX1B-201ENST00000355497 TPRP12270 2363 aaKnown RBP11.94□□□□□ -0.5
LMX1B-201ENST00000355497 ANKRD29Q8N6D5 301 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 CYYR1Q96J86 154 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
LMX1B-201ENST00000355497 SPTBP11277 2137 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
LMX1B-201ENST00000355497 SMIM27A0A1W2PRY6 76 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 C22orf46C9J442 243 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 APOC4P55056 127 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 HERVK_113P63121 156 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 SPANXCQ9NY87 97 aa11.93□□□□□ -0.5
LMX1B-201ENST00000355497 CDKN1BP46527 198 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 KLHDC3Q9BQ90 382 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 ARID2Q68CP9 1835 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 RNF223E7ERA6 249 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 K7EP13 123 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 IGLC2P0DOY2 106 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 IGLC3P0DOY3 106 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 IGHV1-69DA0A0B4J2H0 117 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 A0A1W2PPM0 123 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 H3BRN7 92 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 CFPP27918 469 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 NDUFA4O00483 81 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 ETDBQ3ZM63 59 aa11.92□□□□□ -0.5
LMX1B-201ENST00000355497 TRAV12-2A0A075B6T6 113 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 SHISA9B4DS77 424 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 TMEM14CQ9P0S9 112 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 FAM231DQ6ZW35 169 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 C17orf82Q86X59 251 aaPredicted RBP11.91□□□□□ -0.5
LMX1B-201ENST00000355497 PRR25Q96S07 402 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 V9GYV3 84 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 POLR2AP24928 1970 aaKnown RBP11.91□□□□□ -0.5
LMX1B-201ENST00000355497 SNRNP200O75643 2136 aaKnown RBP11.91□□□□□ -0.5
LMX1B-201ENST00000355497 NDUFC2O95298 119 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 BVES-AS1Q5T3Y7 98 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 SIGLEC8Q9NYZ4 499 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 Q6ZWC4 215 aa11.91□□□□□ -0.5
LMX1B-201ENST00000355497 GATA4P43694 442 aa11.9□□□□□ -0.5
LMX1B-201ENST00000355497 RALGAPA2Q2PPJ7 1873 aa11.9□□□□□ -0.5
LMX1B-201ENST00000355497 PRB1P04280 392 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms