RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PRDM13Q9H4Q3 707 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 LINC00527Q9UJ94 153 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 VPS13CQ709C8 3753 aa12.9□□□□□ -0.34
SAMM50-201ENST00000350028 PTPN13Q12923 2485 aa12.9□□□□□ -0.34
SAMM50-201ENST00000350028 CHEK1O14757 476 aa12.9□□□□□ -0.34
SAMM50-201ENST00000350028 CT45A10P0DMU9 189 aa12.9□□□□□ -0.34
SAMM50-201ENST00000350028 PPIFP30405 207 aaKnown RBP12.9□□□□□ -0.34
SAMM50-201ENST00000350028 CAMPP49913 170 aa12.9□□□□□ -0.34
SAMM50-201ENST00000350028 USMG5Q96IX5 58 aa12.9□□□□□ -0.34
SAMM50-201ENST00000350028 LINC00587B1AMM8 73 aa12.89□□□□□ -0.35
SAMM50-201ENST00000350028 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
SAMM50-201ENST00000350028 U3KQE9 123 aa12.89□□□□□ -0.35
SAMM50-201ENST00000350028 A8MWP6 167 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 F2Z2F3 143 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 HIST2H2BCQ6DN03 193 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
SAMM50-201ENST00000350028 APCP25054 2843 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
SAMM50-201ENST00000350028 HAX1O00165 279 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
SAMM50-201ENST00000350028 IGHG4P01861 327 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 ARL3P36405 182 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 CRIP1P50238 77 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 KLF5Q13887 457 aaPredicted RBP12.88□□□□□ -0.35
SAMM50-201ENST00000350028 IQCJQ1A5X6 159 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 LCN12Q6JVE5 192 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.88□□□□□ -0.35
SAMM50-201ENST00000350028 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 PKIAP61925 76 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 LOXL1Q08397 574 aaPredicted RBP12.87□□□□□ -0.35
SAMM50-201ENST00000350028 Q6AWC8 147 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 PRR25Q96S07 402 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 SAMD10Q9BYL1 202 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 ZNF580Q9UK33 172 aa12.87□□□□□ -0.35
SAMM50-201ENST00000350028 BLCAPP62952 87 aa12.86□□□□□ -0.35
SAMM50-201ENST00000350028 C18orf32Q8TCD1 76 aa12.86□□□□□ -0.35
SAMM50-201ENST00000350028 KCNS1Q96KK3 526 aa12.86□□□□□ -0.35
SAMM50-201ENST00000350028 ASCL2Q99929 193 aa12.86□□□□□ -0.35
SAMM50-201ENST00000350028 ALKBH7Q9BT30 221 aaPredicted RBP12.86□□□□□ -0.35
SAMM50-201ENST00000350028 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
SAMM50-201ENST00000350028 POLQO75417 2590 aa12.86□□□□□ -0.35
SAMM50-201ENST00000350028 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 GPX1P07203 203 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 HLA-DMBP28068 263 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 RIGQ13278 110 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 SIGLECL1Q8N7X8 197 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 SSBP4Q9BWG4 385 aaPredicted RBP12.85□□□□□ -0.35
SAMM50-201ENST00000350028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.85□□□□□ -0.35
SAMM50-201ENST00000350028 A0A1B0GW15 77 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 NDUFA4O00483 81 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 TGFAP01135 160 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 APOHP02749 345 aaPredicted RBP12.85□□□□□ -0.35
SAMM50-201ENST00000350028 PRB4P10163 310 aaPredicted RBP12.85□□□□□ -0.35
SAMM50-201ENST00000350028 FAM162BQ5T6X4 162 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 MRPL53Q96EL3 112 aaKnown RBP12.85□□□□□ -0.35
SAMM50-201ENST00000350028 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
SAMM50-201ENST00000350028 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 MAP1AP78559 2803 aaPredicted RBP12.84□□□□□ -0.35
SAMM50-201ENST00000350028 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 A0A0G2JLM5 398 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 A0A1B0GUT8 65 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 A0A1W2PS18 150 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 TSTD3H0UI37 97 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 SH2D1AO60880 128 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 SCGB1D1O95968 90 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 PF4V1P10720 104 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 BMI1P35226 326 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 DEFB112Q30KQ8 113 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 VGLL1Q99990 258 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 CLEC5AQ9NY25 188 aa12.84□□□□□ -0.35
SAMM50-201ENST00000350028 ZNF705FA8MVS1 300 aaPredicted RBP12.83□□□□□ -0.36
SAMM50-201ENST00000350028 ZNF207O43670 478 aaKnown RBP12.83□□□□□ -0.36
SAMM50-201ENST00000350028 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
SAMM50-201ENST00000350028 KRTAP10-9P60411 292 aa12.83□□□□□ -0.36
SAMM50-201ENST00000350028 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
SAMM50-201ENST00000350028 Q6ZWC4 215 aa12.83□□□□□ -0.36
SAMM50-201ENST00000350028 GATD1Q8NB37 220 aa12.83□□□□□ -0.36
SAMM50-201ENST00000350028 RCHY1Q96PM5 261 aa12.83□□□□□ -0.36
SAMM50-201ENST00000350028 NAGKQ9UJ70 344 aa12.83□□□□□ -0.36
SAMM50-201ENST00000350028 HECTD1Q9ULT8 2610 aa12.83□□□□□ -0.36
SAMM50-201ENST00000350028 BORCS7Q96B45 105 aa12.82□□□□□ -0.36
SAMM50-201ENST00000350028 IGHV3OR16-13A0A075B7E8 117 aa12.82□□□□□ -0.36
SAMM50-201ENST00000350028 IGHV3-74A0A0B4J1X5 117 aa12.82□□□□□ -0.36
SAMM50-201ENST00000350028 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
SAMM50-201ENST00000350028 AMTP48728 403 aa12.82□□□□□ -0.36
SAMM50-201ENST00000350028 SRSF2Q01130 221 aaKnown RBP12.82□□□□□ -0.36
SAMM50-201ENST00000350028 CFHR3Q02985 330 aa12.82□□□□□ -0.36
SAMM50-201ENST00000350028 DEFB113Q30KQ7 82 aa12.82□□□□□ -0.36
SAMM50-201ENST00000350028 Q6ZS46 218 aa12.82□□□□□ -0.36
SAMM50-201ENST00000350028 IGHV3-49A0A0A0MS15 119 aa12.81□□□□□ -0.36
SAMM50-201ENST00000350028 RNF223E7ERA6 249 aa12.81□□□□□ -0.36
SAMM50-201ENST00000350028 GLMPQ8WWB7 406 aa12.81□□□□□ -0.36
SAMM50-201ENST00000350028 KLK15Q9H2R5 256 aa12.81□□□□□ -0.36
SAMM50-201ENST00000350028 UNC79Q9P2D8 2635 aa12.81□□□□□ -0.36
SAMM50-201ENST00000350028 TRAV8-2A0A0B4J237 113 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 661.1 ms