RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TRAV8-1A0A0A6YYK1 113 aa16.34■□□□□ 0.21
TSPAN3-202ENST00000346495 PFN1P07737 140 aaKnown RBP16.34■□□□□ 0.21
TSPAN3-202ENST00000346495 FLI1Q01543 452 aaPredicted RBP16.34■□□□□ 0.21
TSPAN3-202ENST00000346495 C18orf65Q6ZTR6 163 aa16.34■□□□□ 0.21
TSPAN3-202ENST00000346495 PRNTQ86SH4 94 aa16.34■□□□□ 0.21
TSPAN3-202ENST00000346495 MRPL53Q96EL3 112 aaKnown RBP16.34■□□□□ 0.21
TSPAN3-202ENST00000346495 BIN3Q9NQY0 253 aa16.34■□□□□ 0.21
TSPAN3-202ENST00000346495 TMEM213A2RRL7 107 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 FBLL1A6NHQ2 334 aaKnown RBP16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 LINC01619G3V211 115 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 HLA-DMBP28068 263 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 SYNJ2BPP57105 145 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 IGFL4Q6B9Z1 124 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 LCN12Q6JVE5 192 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 KCNIP4Q6PIL6 250 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 PSG8Q9UQ74 426 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 ZFP30Q9Y2G7 519 aa16.33■□□□□ 0.2
TSPAN3-202ENST00000346495 NOTCH2Q04721 2471 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 TCF21O43680 179 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 RAB5AP20339 215 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 IBA57Q5T440 356 aaKnown RBP16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 FAM231DQ6ZW35 169 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 TMEM183AQ8IXX5 376 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 KLHL30-AS1Q8NEE0 82 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 DPF1Q92782 380 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 C16orf92Q96LL3 132 aa16.32■□□□□ 0.2
TSPAN3-202ENST00000346495 TGIF2-C20orf24A0A0A6YYL0 155 aa16.31■□□□□ 0.2
TSPAN3-202ENST00000346495 TRAV8-2A0A0B4J237 113 aa16.31■□□□□ 0.2
TSPAN3-202ENST00000346495 KLF5Q13887 457 aaPredicted RBP16.31■□□□□ 0.2
TSPAN3-202ENST00000346495 OR1N2Q8NGR9 330 aa16.31■□□□□ 0.2
TSPAN3-202ENST00000346495 RNASE7Q9H1E1 156 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-202ENST00000346495 TRBV24-1A0A075B6N3 115 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 CXCL1P09341 107 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 OR11H1Q8NG94 326 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 NRN1Q9NPD7 142 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 V9GYV3 84 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 IGKV2-40A0A087WW87 121 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 ZNF705FA8MVS1 300 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 IGKV2D-40P01614 121 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 FOLR2P14207 255 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 RPL11P62913 178 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 DEFB136Q30KP8 78 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 RNF182Q8N6D2 247 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 IL36BQ9NZH7 164 aa16.3■□□□□ 0.2
TSPAN3-202ENST00000346495 RBAKDNA6NC62 111 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 CRLF1O75462 422 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 CD28P10747 220 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 EDN2P20800 178 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 FOXL1Q12952 345 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 PRR27Q6MZM9 219 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 TCF24Q7RTU0 167 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 ZNF492Q9P255 531 aa16.29■□□□□ 0.2
TSPAN3-202ENST00000346495 SOCS3O14543 225 aa16.28■□□□□ 0.2
TSPAN3-202ENST00000346495 SLURP1P55000 103 aa16.28■□□□□ 0.2
TSPAN3-202ENST00000346495 FAM210BQ96KR6 192 aa16.28■□□□□ 0.2
TSPAN3-202ENST00000346495 PYGO2Q9BRQ0 406 aa16.28■□□□□ 0.2
TSPAN3-202ENST00000346495 RNF114Q9Y508 228 aa16.28■□□□□ 0.2
TSPAN3-202ENST00000346495 SAMD13Q5VXD3 122 aa16.27■□□□□ 0.2
TSPAN3-202ENST00000346495 TSSC4Q9Y5U2 329 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-202ENST00000346495 C2orf70A6NJV1 201 aa16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 ZNF705GA8MUZ8 300 aaPredicted RBP16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 M0QZ24 198 aa16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 HAX1O00165 279 aa16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 GATCO43716 136 aaKnown RBP16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 PRB4P10163 310 aaPredicted RBP16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 CBLN1P23435 193 aa16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 NUDT10Q8NFP7 164 aa16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 NUDT11Q96G61 164 aa16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 BTF3L4Q96K17 158 aa16.27■□□□□ 0.19
TSPAN3-202ENST00000346495 A0A1W2PPQ1 181 aa16.26■□□□□ 0.19
TSPAN3-202ENST00000346495 SAPCD1Q5SSQ6 148 aa16.26■□□□□ 0.19
TSPAN3-202ENST00000346495 PEMTQ9UBM1 199 aa16.26■□□□□ 0.19
TSPAN3-202ENST00000346495 MLXQ9UH92 298 aa16.26■□□□□ 0.19
TSPAN3-202ENST00000346495 PRAC2D3DTV9 90 aa16.25■□□□□ 0.19
TSPAN3-202ENST00000346495 RPS10P46783 165 aaKnown RBP16.25■□□□□ 0.19
TSPAN3-202ENST00000346495 FAM3BP58499 235 aaPredicted RBP16.25■□□□□ 0.19
TSPAN3-202ENST00000346495 GBGT1Q8N5D6 347 aa16.25■□□□□ 0.19
TSPAN3-202ENST00000346495 C11orf44Q8N8P7 122 aa16.25■□□□□ 0.19
TSPAN3-202ENST00000346495 DAZAP1Q96EP5 407 aaKnown RBP16.25■□□□□ 0.19
TSPAN3-202ENST00000346495 VGLL1Q99990 258 aa16.25■□□□□ 0.19
TSPAN3-202ENST00000346495 TRAV9-1A0A075B6T8 112 aa16.24■□□□□ 0.19
TSPAN3-202ENST00000346495 C19orf71A6NCJ1 209 aa16.24■□□□□ 0.19
TSPAN3-202ENST00000346495 PROK1P58294 105 aa16.24■□□□□ 0.19
TSPAN3-202ENST00000346495 CITED2Q99967 270 aaPredicted RBP16.24■□□□□ 0.19
TSPAN3-202ENST00000346495 IGKV3-7A0A075B6H7 116 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 ZNF738Q8NE65 137 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 ZC2HC1AQ96GY0 325 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 C20orf173Q96LM9 149 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 DUX3Q96PT4 197 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 C1orf196B1AJZ1 125 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 LINC00322Q6ZN03 302 aaPredicted RBP16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 COX8CQ7Z4L0 72 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 OR9G4Q8NGQ1 327 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 PRR25Q96S07 402 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 NDFIP1Q9BT67 221 aa16.23■□□□□ 0.19
TSPAN3-202ENST00000346495 MTORP42345 2549 aa16.22■□□□□ 0.19
TSPAN3-202ENST00000346495 A0A1W2PRX2 142 aa16.22■□□□□ 0.19
TSPAN3-202ENST00000346495 P01737 135 aa16.22■□□□□ 0.19
TSPAN3-202ENST00000346495 CT45A10P0DMU9 189 aa16.22■□□□□ 0.19
TSPAN3-202ENST00000346495 ID1P41134 155 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms