RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CGB7P0DN87 165 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 UNQ6494/PRO21346Q6UXR6 183 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 KIR2DL5AQ8N109 375 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 FAM110DQ8TAY7 271 aaPredicted RBP7.93□□□□□ -1.14
COL4A6-201ENST00000334504 CABIN1Q9Y6J0 2220 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 IGLV3-32A0A0A0MS00 114 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 KNCNA6PVL3 124 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 SRRM5B3KS81 715 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 THBDP07204 575 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 SNRNP200O75643 2136 aaKnown RBP7.92□□□□□ -1.14
COL4A6-201ENST00000334504 NPYP01303 97 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 NBL1P41271 181 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
COL4A6-201ENST00000334504 MSRB2Q9Y3D2 182 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 PINLYPA6NC86 204 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 NDUFS7O75251 213 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 NXPH4O95158 308 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 DEFB125Q8N687 156 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 HS3ST6Q96QI5 342 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 C20orf204Q6ZNR8 217 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 SPRR3Q9UBC9 169 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 SIGLEC9Q9Y336 463 aa7.92□□□□□ -1.14
COL4A6-201ENST00000334504 PSME4Q14997 1843 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 MTCL1Q9Y4B5 1905 aaKnown RBP7.91□□□□□ -1.14
COL4A6-201ENST00000334504 EFNA2O43921 213 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 LHBP01229 141 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 EFNA4P52798 201 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 MRPL23Q16540 153 aaKnown RBP7.91□□□□□ -1.14
COL4A6-201ENST00000334504 IGHV3-16A0A0C4DH30 117 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 THSD7AQ9UPZ6 1657 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 TRAV13-2A0A0B4J235 113 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 J3QQQ9 107 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 BAALC-AS2P0C853 105 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 PDE6HQ13956 83 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 RNF5Q99942 180 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 CEP290O15078 2479 aa7.91□□□□□ -1.14
COL4A6-201ENST00000334504 F8VRH5 84 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 IGHG2P01859 326 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 CLPSP04118 112 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 GATA4P43694 442 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 C5orf64Q2M2E5 130 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 PAX9P55771 341 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 CFHR1Q03591 330 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 MRPL14Q6P1L8 145 aaKnown RBP7.9□□□□□ -1.14
COL4A6-201ENST00000334504 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 TMEM105Q8N8V8 129 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 TRAV26-1A0A087WT03 109 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 CFC1BP0CG36 223 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 CFC1P0CG37 223 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 Q6ZS49 121 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 GAFA1Q96PS6 74 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 RP1P56715 2156 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 PLXNA1Q9UIW2 1896 aa7.9□□□□□ -1.14
COL4A6-201ENST00000334504 FAM231DQ6ZW35 169 aa7.9□□□□□ -1.15
COL4A6-201ENST00000334504 RHPN1-AS1Q9BWJ2 59 aa7.9□□□□□ -1.15
COL4A6-201ENST00000334504 COL24A1Q17RW2 1714 aa7.9□□□□□ -1.15
COL4A6-201ENST00000334504 PCP2Q8IVA1 136 aa7.9□□□□□ -1.15
COL4A6-201ENST00000334504 SDHAF1A6NFY7 115 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 BUB1B-PAK6H3BSN5 160 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 CMC4P56277 68 aaPredicted RBP7.89□□□□□ -1.15
COL4A6-201ENST00000334504 ZNF318Q5VUA4 2279 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 IGHV3-38A0A0C4DH36 116 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 PRSS29PA6NIE9 313 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 KLK9Q9UKQ9 250 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 SPTA1P02549 2419 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 IGLL5B9A064 214 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 CLPSL1A2RUU4 121 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 FLVCR1-AS1Q8TAF5 88 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 SBF2Q86WG5 1849 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 NTN3O00634 580 aaPredicted RBP7.89□□□□□ -1.15
COL4A6-201ENST00000334504 IGKV1-16P04430 117 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 FAM236AA0A1B0GUQ0 79 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 FAM236BA0A1B0GV22 79 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 A0A1B0GX51 115 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 ACYP1P07311 99 aa7.89□□□□□ -1.15
COL4A6-201ENST00000334504 M0R1W7 72 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.88□□□□□ -1.15
COL4A6-201ENST00000334504 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 CFHR3Q02985 330 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 FAM223AQ8IWN6 122 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 TMEM178BH3BS89 294 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 RNASE6Q93091 150 aaKnown RBP7.88□□□□□ -1.15
COL4A6-201ENST00000334504 TRBV19A0A075B6N1 114 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 A0A1W2PPI3 338 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 EGR2P11161 476 aaPredicted RBP7.88□□□□□ -1.15
COL4A6-201ENST00000334504 GGNQ86UU5 652 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 TRBV25-1A0A075B6N4 114 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 ZNF561-AS1K7EIQ3 104 aa7.88□□□□□ -1.15
COL4A6-201ENST00000334504 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
COL4A6-201ENST00000334504 K7EN84 100 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 NDUFS5O43920 106 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 CRYGCP07315 174 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 DEFB130BP0DP73 79 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 DEFB130AP0DP74 79 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 C8orf86Q6ZUL3 223 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms