RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RNF125Q96EQ8 232 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 LINC00477Q96M19 166 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 HEATR1Q9H583 2144 aaKnown RBP5.26□□□□□ -1.57
ZNF540-201ENST00000316433 DSCAML1Q8TD84 2053 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 TINCRA0A1B0GVN0 87 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 LINC01546A6NGU7 62 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 SPINT2O43291 252 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 NPYP01303 97 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 MALP21145 153 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 TEX36Q5VZQ5 186 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 MAPKAPK5-AS1Q8N8E1 139 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 OR11H6Q8NGC7 330 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 SLC25A2Q9BXI2 301 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 IGLV3-9A0A075B6K5 115 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 FAM236AA0A1B0GUQ0 79 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 FAM236BA0A1B0GV22 79 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 C17orf98A8MV24 154 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 LINC01619G3V211 115 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 PEX7O00628 323 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 ATP5LO75964 103 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 CA6P23280 308 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF672Q499Z4 452 aaPredicted RBP5.25□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF493Q6ZR52 646 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 PDPNQ86YL7 162 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF488Q96MN9 340 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 TRGV9Q99603 122 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 PRSS22Q9GZN4 317 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 AGRNO00468 2067 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 TRBV7-7A0A0K0K1E9 115 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 SLC25A20O43772 301 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 P01737 135 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 IGKCP01834 107 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 FOXF2Q12947 444 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 Q5XG85 94 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF833PQ6ZTB9 187 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 MDP1Q86V88 176 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 IGFBPL1Q8WX77 278 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 C1orf43Q9BWL3 253 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 CALYQ9NYX4 217 aa5.25□□□□□ -1.57
ZNF540-201ENST00000316433 CHD7Q9P2D1 2997 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 LOC389332A0A1B0GUA5 103 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 IGHV3-13P01766 116 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 FXYD7P58549 80 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.57
ZNF540-201ENST00000316433 LINC01559Q495D7 138 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 SRRM4A7MD48 611 aaKnown RBP5.24□□□□□ -1.57
ZNF540-201ENST00000316433 Q8N1Y9 231 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 NABP2Q9BQ15 211 aa5.24□□□□□ -1.57
ZNF540-201ENST00000316433 LINC00473A8K010 186 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 TIMM23O14925 209 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 PROP1O75360 226 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 TMEM155Q4W5P6 130 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 TMEM14CQ9P0S9 112 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 CACNA1EQ15878 2313 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 PSPNO60542 156 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 ERVK-16P61578 105 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 PAX8Q06710 450 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 LINC00322Q6ZN03 302 aaPredicted RBP5.23□□□□□ -1.57
ZNF540-201ENST00000316433 WFDC3Q8IUB2 231 aa5.23□□□□□ -1.57
ZNF540-201ENST00000316433 NTN5Q8WTR8 489 aaPredicted RBP5.23□□□□□ -1.57
ZNF540-201ENST00000316433 C19orf71A6NCJ1 209 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 K7EM74 188 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 UPK2O00526 184 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 CDX4O14627 284 aaPredicted RBP5.22□□□□□ -1.57
ZNF540-201ENST00000316433 DPM2O94777 84 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 UBE2D1P51668 147 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 UBE2L3P68036 154 aaKnown RBP5.22□□□□□ -1.57
ZNF540-201ENST00000316433 SLC25A48Q6ZT89 311 aaKnown RBP5.22□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF329Q86UD4 541 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 POM121L12Q8N7R1 296 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 NUP37Q8NFH4 326 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 DPH3Q96FX2 82 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 AAMDCQ9H7C9 122 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 TRGV11A0A075B6L2 103 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 ENSAO43768 121 aaKnown RBP5.22□□□□□ -1.57
ZNF540-201ENST00000316433 PMVKQ15126 192 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 TWIST1Q15672 202 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 PLA2G2CQ5R387 149 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 KLF14Q8TD94 323 aaPredicted RBP5.22□□□□□ -1.57
ZNF540-201ENST00000316433 FAM167A-AS1Q96KT0 104 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 MLST8Q9BVC4 326 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 SPANXDQ9BXN6 97 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 V9GYY9 64 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 MYO7AQ13402 2215 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 IGHV3OR15-7A0A075B7D8 119 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 A0A1B0GUT8 65 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 DLL1O00548 723 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 OVOL1O14753 267 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 CD3EP07766 207 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 RPL35AP18077 110 aaKnown RBP5.22□□□□□ -1.57
ZNF540-201ENST00000316433 IGHV1-2P23083 117 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 EFNA4P52798 201 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 RIGQ13278 110 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF56Q15929 161 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 MBD3L2Q8NHZ7 208 aaPredicted RBP5.22□□□□□ -1.57
ZNF540-201ENST00000316433 JPT2Q9H910 190 aa5.22□□□□□ -1.57
ZNF540-201ENST00000316433 C5orf42Q9H799 3197 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms