RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 AAMDCQ9H7C9 122 aa13.72□□□□□ -0.21
TRAM1-201ENST00000262213 KAAG1Q9UBP8 84 aa13.72□□□□□ -0.21
TRAM1-201ENST00000262213 FAM104BQ5XKR9 115 aa13.72□□□□□ -0.21
TRAM1-201ENST00000262213 PPIAL4CA0A0B4J2A2 164 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 PPIAL4GP0DN37 164 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 RIPPLY3P57055 190 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 TWIST1Q15672 202 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 PCP2Q8IVA1 136 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 MEGF9Q9H1U4 602 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 APOBEC3AP31941 199 aaPredicted RBP13.71□□□□□ -0.21
TRAM1-201ENST00000262213 CKS2P33552 79 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 SEC11AP67812 179 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 LRBAP50851 2863 aa13.71□□□□□ -0.21
TRAM1-201ENST00000262213 IGHV3-35A0A0C4DH35 117 aa13.71□□□□□ -0.22
TRAM1-201ENST00000262213 TRBV6-1A0A0K0K1D8 114 aa13.71□□□□□ -0.22
TRAM1-201ENST00000262213 A0A1B0GW15 77 aa13.71□□□□□ -0.22
TRAM1-201ENST00000262213 NPYP01303 97 aa13.71□□□□□ -0.22
TRAM1-201ENST00000262213 HES1Q14469 280 aa13.71□□□□□ -0.22
TRAM1-201ENST00000262213 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 A1L4Q6 167 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 KIR3DS1Q14943 382 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 SMIM15Q7Z3B0 74 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 ARL6IP6Q8N6S5 226 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 DKK2Q9UBU2 259 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 MED13LQ71F56 2210 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 NPIPB5A8MRT5 1133 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 K7ERU9 68 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 RPS20P60866 119 aaKnown RBP13.7□□□□□ -0.22
TRAM1-201ENST00000262213 Q6AWC8 147 aa13.7□□□□□ -0.22
TRAM1-201ENST00000262213 SHISA9B4DS77 424 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 MRPS12O15235 138 aaKnown RBP13.69□□□□□ -0.22
TRAM1-201ENST00000262213 HBDP02042 147 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 IFI27L1Q96BM0 104 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 MSRB1Q9NZV6 116 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 A6NDN8 102 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
TRAM1-201ENST00000262213 HLA-DMBP28068 263 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 PAX2Q02962 417 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 GFRALQ6UXV0 394 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 TNFRSF14Q92956 283 aa13.69□□□□□ -0.22
TRAM1-201ENST00000262213 EGR2P11161 476 aaPredicted RBP13.68□□□□□ -0.22
TRAM1-201ENST00000262213 ZNF493Q6ZR52 646 aa13.68□□□□□ -0.22
TRAM1-201ENST00000262213 GATD1Q8NB37 220 aa13.68□□□□□ -0.22
TRAM1-201ENST00000262213 GAS8-AS1O95177 125 aa13.68□□□□□ -0.22
TRAM1-201ENST00000262213 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
TRAM1-201ENST00000262213 TTTY13Q9BZ97 58 aa13.68□□□□□ -0.22
TRAM1-201ENST00000262213 C9orf118A6NHY6 69 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 LY6HO94772 140 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 LGALS9BQ3B8N2 356 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 LGALS9CQ6DKI2 356 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 LYPD1Q8N2G4 141 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 A0A0G2JLM5 398 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 ZNF80P51504 273 aaPredicted RBP13.67□□□□□ -0.22
TRAM1-201ENST00000262213 KLRD1Q13241 179 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 VGLL1Q99990 258 aa13.67□□□□□ -0.22
TRAM1-201ENST00000262213 PPIFP30405 207 aaKnown RBP13.66□□□□□ -0.22
TRAM1-201ENST00000262213 GTF2H5Q6ZYL4 71 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 FER1L6-AS1Q8NA97 138 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 NDUFS7O75251 213 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 ORM1P02763 201 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 EVI2AP22794 236 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 H3BRM9 83 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 NBR2O15453 112 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 U3KQK5 164 aa13.66□□□□□ -0.22
TRAM1-201ENST00000262213 DCHS2Q6V1P9 2916 aa13.65□□□□□ -0.22
TRAM1-201ENST00000262213 WI2-2373I1.2A0A1W2PRP0 233 aa13.65□□□□□ -0.22
TRAM1-201ENST00000262213 NBASA2RRP1 2371 aa13.65□□□□□ -0.22
TRAM1-201ENST00000262213 HSD52Q0P140 79 aa13.65□□□□□ -0.22
TRAM1-201ENST00000262213 OR1N2Q8NGR9 330 aa13.65□□□□□ -0.22
TRAM1-201ENST00000262213 PRR25Q96S07 402 aa13.65□□□□□ -0.22
TRAM1-201ENST00000262213 ZFHX2Q9C0A1 2572 aaPredicted RBP13.64□□□□□ -0.23
TRAM1-201ENST00000262213 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
TRAM1-201ENST00000262213 PRR30Q53SZ7 412 aaPredicted RBP13.64□□□□□ -0.23
TRAM1-201ENST00000262213 UFSP1Q6NVU6 142 aa13.64□□□□□ -0.23
TRAM1-201ENST00000262213 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
TRAM1-201ENST00000262213 NCBP2LA6PVI3 153 aaKnown RBP13.63□□□□□ -0.23
TRAM1-201ENST00000262213 GATA1P15976 413 aaPredicted RBP13.63□□□□□ -0.23
TRAM1-201ENST00000262213 CSTL1Q9H114 145 aa13.63□□□□□ -0.23
TRAM1-201ENST00000262213 GCSHP23434 173 aa13.63□□□□□ -0.23
TRAM1-201ENST00000262213 MFAP4P55083 255 aa13.63□□□□□ -0.23
TRAM1-201ENST00000262213 ABHD17AQ96GS6 310 aa13.63□□□□□ -0.23
TRAM1-201ENST00000262213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.62□□□□□ -0.23
TRAM1-201ENST00000262213 K7EMI3 77 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 K7EP34 96 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 LEPP41159 167 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 NBL1P41271 181 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 ERCC8Q13216 396 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 LINC01560Q8TB33 94 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 FANCD2OSQ96PS1 177 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 LY6LH3BQJ8 138 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 OR9G4Q8NGQ1 327 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 SPCS1Q9Y6A9 102 aa13.62□□□□□ -0.23
TRAM1-201ENST00000262213 IGKV2D-26A0A0A0MRZ7 120 aa13.61□□□□□ -0.23
TRAM1-201ENST00000262213 PRSS1P07477 247 aa13.61□□□□□ -0.23
TRAM1-201ENST00000262213 DPF1Q92782 380 aa13.61□□□□□ -0.23
TRAM1-201ENST00000262213 RAB1BQ9H0U4 201 aa13.61□□□□□ -0.23
TRAM1-201ENST00000262213 BSNQ9UPA5 3926 aa13.61□□□□□ -0.23
TRAM1-201ENST00000262213 PAX8Q06710 450 aa13.61□□□□□ -0.23
TRAM1-201ENST00000262213 C21orf62Q9NYP8 219 aa13.61□□□□□ -0.23
TRAM1-201ENST00000262213 SPTA1P02549 2419 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms