RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 A0A087X0K7 114 aa16.39■□□□□ 0.21
CCDC130-201ENST00000221554 ARMS2P0C7Q2 107 aa16.39■□□□□ 0.21
CCDC130-201ENST00000221554 HSPB8Q9UJY1 196 aa16.39■□□□□ 0.21
CCDC130-201ENST00000221554 IGHV1-24A0A0C4DH33 117 aa16.38■□□□□ 0.21
CCDC130-201ENST00000221554 ITLN2Q8WWU7 325 aaPredicted RBP16.38■□□□□ 0.21
CCDC130-201ENST00000221554 AJUBAQ96IF1 538 aa16.38■□□□□ 0.21
CCDC130-201ENST00000221554 FASNP49327 2511 aaKnown RBP16.38■□□□□ 0.21
CCDC130-201ENST00000221554 GCN1Q92616 2671 aaKnown RBP16.38■□□□□ 0.21
CCDC130-201ENST00000221554 SAA4P35542 130 aa16.38■□□□□ 0.21
CCDC130-201ENST00000221554 RELQ04864 619 aaPredicted RBP16.38■□□□□ 0.21
CCDC130-201ENST00000221554 BCL6BQ8N143 479 aaPredicted RBP16.38■□□□□ 0.21
CCDC130-201ENST00000221554 PRR25Q96S07 402 aa16.38■□□□□ 0.21
CCDC130-201ENST00000221554 NPFFO15130 113 aa16.37■□□□□ 0.21
CCDC130-201ENST00000221554 NDUFS7O75251 213 aa16.37■□□□□ 0.21
CCDC130-201ENST00000221554 HNRNPA3P51991 378 aaKnown RBP16.37■□□□□ 0.21
CCDC130-201ENST00000221554 C15orf32Q32M92 178 aa16.37■□□□□ 0.21
CCDC130-201ENST00000221554 COL5A1-AS1Q5SY13 56 aa16.37■□□□□ 0.21
CCDC130-201ENST00000221554 FAM120AOSQ5T036 256 aa16.37■□□□□ 0.21
CCDC130-201ENST00000221554 Q6ZN92 141 aa16.37■□□□□ 0.21
CCDC130-201ENST00000221554 C8orf49Q96NF6 230 aa16.37■□□□□ 0.21
CCDC130-201ENST00000221554 MRPS16Q9Y3D3 137 aaKnown RBP16.37■□□□□ 0.21
CCDC130-201ENST00000221554 ABCA4P78363 2273 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 TRBV7-1A0A0A6YYK4 115 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 SYS1-DBNDD2H3BUS1 97 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 SH2D1AO60880 128 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 IGHV3-23P01764 117 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 PET117Q6UWS5 81 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 EEF1AKMT3Q96AZ1 226 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 SLC50A1Q9BRV3 221 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 MAP1LC3CQ9BXW4 147 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 ARHGAP32A7KAX9 2087 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 CENPVL3A0A0U1RRI6 287 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 RBAKDNA6NC62 111 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 RHOGP84095 191 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 LCN12Q6JVE5 192 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 BPESC1Q9GZL8 116 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 TMEM191AQ9H0A3 160 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 SMAD5-AS1Q9Y6J3 95 aa16.36■□□□□ 0.21
CCDC130-201ENST00000221554 LRRK2Q5S007 2527 aa16.35■□□□□ 0.21
CCDC130-201ENST00000221554 ATP6V0E1O15342 81 aa16.35■□□□□ 0.21
CCDC130-201ENST00000221554 UTP20O75691 2785 aaKnown RBP16.34■□□□□ 0.21
CCDC130-201ENST00000221554 ECSCRQ19T08 205 aa16.34■□□□□ 0.21
CCDC130-201ENST00000221554 CLEC3BP05452 202 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 GPR183P32249 361 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 UQCRFS1P47985 274 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 LYZL1Q6UWQ5 148 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 ZFAND3Q9H8U3 227 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 ST20Q9HBF5 79 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 AP5S1Q9NUS5 200 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 CLEC5AQ9NY25 188 aa16.33■□□□□ 0.21
CCDC130-201ENST00000221554 ABCA1O95477 2261 aa16.33■□□□□ 0.2
CCDC130-201ENST00000221554 IGKV2-40A0A087WW87 121 aaPredicted RBP16.33■□□□□ 0.2
CCDC130-201ENST00000221554 BUB3O43684 328 aa16.33■□□□□ 0.2
CCDC130-201ENST00000221554 IGKV2D-40P01614 121 aaPredicted RBP16.33■□□□□ 0.2
CCDC130-201ENST00000221554 FA2HQ7L5A8 372 aa16.33■□□□□ 0.2
CCDC130-201ENST00000221554 U3KQK5 164 aa16.33■□□□□ 0.2
CCDC130-201ENST00000221554 OR4C46A6NHA9 309 aa16.32■□□□□ 0.2
CCDC130-201ENST00000221554 Q71RC1 249 aaPredicted RBP16.32■□□□□ 0.2
CCDC130-201ENST00000221554 PRSS3P2Q8NHM4 247 aa16.32■□□□□ 0.2
CCDC130-201ENST00000221554 MRPL53Q96EL3 112 aaKnown RBP16.32■□□□□ 0.2
CCDC130-201ENST00000221554 LAMTOR2Q9Y2Q5 125 aa16.32■□□□□ 0.2
CCDC130-201ENST00000221554 FAM104BQ5XKR9 115 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 ATOH7Q8N100 152 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 TPPP3Q9BW30 176 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 SPTAN1Q13813 2472 aaKnown RBP16.31■□□□□ 0.2
CCDC130-201ENST00000221554 FABP5P3A8MUU1 101 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 HSBP1L1C9JCN9 74 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 M0QZ24 198 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 GNLYP22749 145 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 TSPOP30536 169 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 C5orf56Q8N8D9 126 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 OR10AG1Q8NH19 301 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 HIF1ANQ9NWT6 349 aa16.31■□□□□ 0.2
CCDC130-201ENST00000221554 CRIP2P52943 208 aaPredicted RBP16.3■□□□□ 0.2
CCDC130-201ENST00000221554 PAX8Q06710 450 aa16.3■□□□□ 0.2
CCDC130-201ENST00000221554 GAGE1Q13065 139 aa16.3■□□□□ 0.2
CCDC130-201ENST00000221554 SPATA12Q7Z6I5 190 aa16.3■□□□□ 0.2
CCDC130-201ENST00000221554 ORMDL3Q8N138 153 aa16.3■□□□□ 0.2
CCDC130-201ENST00000221554 FER1L6-AS1Q8NA97 138 aa16.3■□□□□ 0.2
CCDC130-201ENST00000221554 MOB4Q9Y3A3 225 aa16.3■□□□□ 0.2
CCDC130-201ENST00000221554 IGHG4P01861 327 aa16.29■□□□□ 0.2
CCDC130-201ENST00000221554 IGLL1P15814 213 aa16.29■□□□□ 0.2
CCDC130-201ENST00000221554 METTL26Q96S19 204 aa16.29■□□□□ 0.2
CCDC130-201ENST00000221554 FAM223BA6NKX1 122 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 ATP5G2Q06055 141 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 FAM223AQ8IWN6 122 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 ASCL2Q99929 193 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 MS4A6AQ9H2W1 248 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 IGLC6P0CF74 106 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 ZNF25P17030 456 aaPredicted RBP16.28■□□□□ 0.2
CCDC130-201ENST00000221554 BATFQ16520 125 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 PIP4P2Q8N4L2 257 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 VGLL1Q99990 258 aa16.28■□□□□ 0.2
CCDC130-201ENST00000221554 CSN3P07498 182 aa16.27■□□□□ 0.2
CCDC130-201ENST00000221554 CLEC19AQ6UXS0 136 aa16.27■□□□□ 0.2
CCDC130-201ENST00000221554 CCDC140Q96MF4 163 aa16.27■□□□□ 0.2
CCDC130-201ENST00000221554 PRELID3AQ96N28 172 aa16.27■□□□□ 0.2
CCDC130-201ENST00000221554 NDUFS8O00217 210 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 PIMREGQ9BSJ6 248 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms