RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PINLYPA6NC86 204 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 SRD5A1P18405 259 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 IGKV1-6A0A0C4DH72 117 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 RNASE2P10153 161 aaKnown RBP8.45□□□□□ -1.06
VCL-201ENST00000211998 C17orf82Q86X59 251 aaPredicted RBP8.45□□□□□ -1.06
VCL-201ENST00000211998 MYOFQ9NZM1 2061 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 RALGAPA1Q6GYQ0 2036 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 ICE1Q9Y2F5 2266 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 DOCK9Q9BZ29 2069 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 OOSP1A8MZH6 123 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 IGHG4P01861 327 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
VCL-201ENST00000211998 TMEM258P61165 79 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 KLRD1Q13241 179 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 LY6G5BQ8NDX9 201 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 TP53TG1Q9Y2A0 90 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 A0A0G2JMZ2 1700 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 TRGV11A0A075B6L2 103 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 PLA2G2EQ9NZK7 142 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 SVILO95425 2214 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 SRRM5B3KS81 715 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 Q6P435 159 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 SIGLEC15Q6ZMC9 328 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 PRIMA1Q86XR5 153 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 C11orf52Q96A22 123 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 IGHV3-73A0A0B4J1V6 119 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 A0A1W2PRX2 142 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 EFNA4P52798 201 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 IL17RELQ6ZVW7 336 aa8.44□□□□□ -1.06
VCL-201ENST00000211998 SPTA1P02549 2419 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 TIMM23O14925 209 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 GGNQ86UU5 652 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 RNF5Q99942 180 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 RBX1P62877 108 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 RNF183Q96D59 192 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 ARHGEF17Q96PE2 2063 aaPredicted RBP8.43□□□□□ -1.06
VCL-201ENST00000211998 LRRK1Q38SD2 2015 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 NYNRINQ9P2P1 1898 aaKnown RBP8.43□□□□□ -1.06
VCL-201ENST00000211998 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 FOXI1Q12951 378 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 MINOS1Q5TGZ0 78 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 MINOS1-NBL1R4GNA1 71 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 AHCTF1Q8WYP5 2266 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 ESPL1Q14674 2120 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
VCL-201ENST00000211998 F8VRH5 84 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 ZNF672Q499Z4 452 aaPredicted RBP8.42□□□□□ -1.06
VCL-201ENST00000211998 LINC00173Q6ZV60 143 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 C1orf147Q96MC9 270 aaPredicted RBP8.42□□□□□ -1.06
VCL-201ENST00000211998 IGKV1-39P01597 117 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 IGKV1D-39P04432 117 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 PAX8Q06710 450 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 ERCC8Q13216 396 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 WIPF2Q8TF74 440 aaPredicted RBP8.42□□□□□ -1.06
VCL-201ENST00000211998 CHD3Q12873 2000 aaKnown RBP8.42□□□□□ -1.06
VCL-201ENST00000211998 RTTNQ86VV8 2226 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 A0A087WWL8 130 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 TRAV41A0A0B4J266 112 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 HAMPP81172 84 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 CD177Q8N6Q3 437 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
VCL-201ENST00000211998 TRBV25-1A0A075B6N4 114 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 NDUFC2O95298 119 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 FAM236AA0A1B0GUQ0 79 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 FAM236BA0A1B0GV22 79 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 CFC1P0CG37 223 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 TEN1Q86WV5 123 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 K7EMI3 77 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 DTX2Q86UW9 622 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 TRAV26-2A0A0B4J265 109 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 HTN3P15516 51 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 HS3ST6Q96QI5 342 aa8.41□□□□□ -1.06
VCL-201ENST00000211998 SRRM4A7MD48 611 aaKnown RBP8.4□□□□□ -1.06
VCL-201ENST00000211998 A0A087WX48 190 aa8.4□□□□□ -1.06
VCL-201ENST00000211998 LYNX1G3V0Z9 82 aa8.4□□□□□ -1.06
VCL-201ENST00000211998 H0YJW9 148 aa8.4□□□□□ -1.06
VCL-201ENST00000211998 LYNX1P0DP58 116 aa8.4□□□□□ -1.06
VCL-201ENST00000211998 FOXG1P55316 489 aaPredicted RBP8.4□□□□□ -1.06
VCL-201ENST00000211998 LY6DQ14210 128 aa8.4□□□□□ -1.06
VCL-201ENST00000211998 LCTP09848 1927 aa8.4□□□□□ -1.06
VCL-201ENST00000211998 FXYD2P54710 66 aa8.4□□□□□ -1.06
VCL-201ENST00000211998 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.07
VCL-201ENST00000211998 IGHV1-8P0DP01 117 aa8.4□□□□□ -1.07
VCL-201ENST00000211998 ZCCHC24Q8N2G6 241 aaKnown RBP8.4□□□□□ -1.07
VCL-201ENST00000211998 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.07
VCL-201ENST00000211998 SHANK2-AS3Q9BTD1 123 aa8.4□□□□□ -1.07
VCL-201ENST00000211998 TMEM178BH3BS89 294 aa8.4□□□□□ -1.07
VCL-201ENST00000211998 M0R1W7 72 aa8.4□□□□□ -1.07
VCL-201ENST00000211998 TCTEX1D4Q5JR98 221 aa8.4□□□□□ -1.07
VCL-201ENST00000211998 LINC01545Q5VT33 79 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 VMO1Q7Z5L0 202 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 MDS2Q8NDY4 140 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 SSC4DQ8WTU2 575 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 C1orf159Q96HA4 380 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 B4DSR2 109 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 ACYP1P07311 99 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms